bioskills-coexpression-networks

name	bioskills-coexpression-networks
description	Build weighted gene co-expression networks (WGCNA) to detect co-regulated gene modules, correlate them with sample traits, and identify hub genes; includes CEMiTool, hdWGCNA (single-cell), and PyWGCNA alternatives.
domain	single-cell
primary_tool	WGCNA
methods	["WGCNA","CEMiTool","hdWGCNA","PyWGCNA"]
macro_tags	["co-expression","wgcna","module-detection","hub-genes","network","trait-correlation"]
micro_tags	["WGCNA","CEMiTool","hdWGCNA","PyWGCNA","blockwiseModules","pickSoftThreshold","soft-thresholding","module-detection","eigengenes","trait-correlation","hub-genes","module-membership","gene-significance","connectivity","cytoscape","metacells","single-cell"]
source	bioskills-coexpression-networks
status	active
enabled	true

Bioskills Coexpression Networks