القائمة
Explain where project data and outputs live (e.g. GPFS, data/, predictions/) from knowledge base.
التثبيت باستخدام Codex أو Claude انسخ هذا Prompt والصقه في Codex أو Claude أو مساعد آخر ليراجع صفحة Skill ويثبّتها لك.
استنادا إلى تصنيف SOC المهني
Manage the BioAPEX current-feature workflow from scoping through review and completion
Turn an analysis request into a Slurm-ready execution plan with commands, resource assumptions, and job structure.
Scale a buffer recipe to a target volume and compute component masses/volumes.
Save a fetched summary or document to the knowledge base for later retrieval (e.g. after PubMed/UniProt lookup).
Interpret scRNA clusters using marker genes and suggest cell type or state.
Critically evaluate a perturbation hypothesis — challenge assumptions, propose negative controls, and flag confounders.
| name | data_location_help |
| description | Explain where project data and outputs live (e.g. GPFS, data/, predictions/) from knowledge base. |
| category | bio/compute |
| version | 1 |
| requires_tools | ["search_knowledge_base"] |
| requires_network | false |
| user_invocable | true |
| species | any |
| modality | compute |
| stage | utilities |
| stability | experimental |
| safety_level | low |
User asks where data is stored, where to find results, or what directories to use for a pipeline.
Search: Use search_knowledge_base with query like "data location", "where is data", "GPFS", "predictions directory", or the topic.
Summarize: Return paths and conventions (e.g. data/ for raw, predictions/ for outputs, tmp/ for scratch). If nothing found, state that and suggest asking the lab or checking project README.
Remind: Note that paths may be project-relative (e.g. backend is project root for read_file; for terminal, CWD may differ).
