القائمة
Parse common pipeline log/output and summarize metrics and status.
التثبيت باستخدام Codex أو Claude انسخ هذا Prompt والصقه في Codex أو Claude أو مساعد آخر ليراجع صفحة Skill ويثبّتها لك.
استنادا إلى تصنيف SOC المهني
Manage the BioAPEX current-feature workflow from scoping through review and completion
Turn an analysis request into a Slurm-ready execution plan with commands, resource assumptions, and job structure.
Scale a buffer recipe to a target volume and compute component masses/volumes.
Save a fetched summary or document to the knowledge base for later retrieval (e.g. after PubMed/UniProt lookup).
Interpret scRNA clusters using marker genes and suggest cell type or state.
Critically evaluate a perturbation hypothesis — challenge assumptions, propose negative controls, and flag confounders.
| name | results_summarizer |
| description | Parse common pipeline log/output and summarize metrics and status. |
| category | bio/compute |
| version | 1 |
| requires_tools | ["read_file","python_repl"] |
| requires_network | false |
| user_invocable | true |
| species | any |
| modality | compute |
| stage | reporting |
| stability | experimental |
| safety_level | low |
User has a log file or pipeline output and wants a short summary of metrics, errors, or completion status.
Read: Use read_file to load the file (or first/last N lines if very large).
Parse: Look for common patterns:
Summarize: State: success/failure, key metrics if found, any errors, and suggested next step if failed.
