القائمة
Create or revise Bioinfo-skills analysis section specifications and section.yml contracts.
التثبيت باستخدام Codex أو Claude انسخ هذا Prompt والصقه في Codex أو Claude أو مساعد آخر ليراجع صفحة Skill ويثبّتها لك.
استنادا إلى تصنيف SOC المهني
Perform a non-destructive cross-artifact consistency and quality analysis across spec.md, plan.md, and tasks.md after task generation.
Generate a custom checklist for the current feature based on user requirements.
Identify underspecified areas in the current feature spec by asking up to 5 highly targeted clarification questions and encoding answers back into the spec.
Create or update the project constitution from interactive or provided principle inputs, ensuring all dependent templates stay in sync.
Create or refresh a current-understanding.md continuity report for a Bioinfo SDD feature or half-finished workflow by reviewing current specs, plans, tasks, section state, installed refs, selected packages/tools, wrappers, adapters, checks, evidence, and unresolved next steps.
Auto-commit changes after a BioKit command completes
| name | bioinfo-sdd-spec-section |
| description | Create or revise Bioinfo-skills analysis section specifications and section.yml contracts. |
| compatibility | Bioinfo-skills section SDD; Linux/Codex |
| metadata | {"author":"bioinfo-skills","source":"SPEC/bioinfo_native_section_sdd_plan.md"} |
Use this skill when creating or revising spec.md and section.yml for a
Bioinfo-skills analysis section.
SPEC/bioinfo_native_section_sdd_plan.md.pack_refs under sdd/packs/*/pack.yml before choosing
workflow and task refs.tool_market/, not as pack-wide defaults.section.yml as the machine-readable source of truth.section.yml declares required gates, refs, allowed claims,
forbidden claims, expected artifacts, and review status before Markdown
artifacts expand on them.spec.md, state biological intent, required input state, produced output
state, allowed claims, forbidden claims, and review gate status.bioinfo-sdd validate-section <section_id> or
PYTHONPATH=src python -m bioinfo_sdd validate-section <section_id>.spec_review unless it is already approved.Do not embed backend syntax in task or stage descriptions. Do not claim normalization, feature selection, PCA, annotation, condition inference, or biological interpretation unless the section explicitly implements and validates that state transition.