foryourhealth111-pixel/Vibe-Skills

vibe

Vibe Code Orchestrator (VCO) is a governed runtime entry that freezes requirements, bounds execution, and enforces verification and phase cleanup.

لغة النص الأصلي: الإنجليزية

autonomous-builder

Full-stack software development agent for design, implementation, testing, and deployment. Use when the user explicitly asks for end-to-end project creation, feature development, bug fixing, or code refactoring.

لغة النص الأصلي: الإنجليزية

commit-with-reflection

Git提交与调试反思报告生成技能。用于分析开发过程中的错误、调试步骤和解决方案,生成结构化的中文反思报告,并创建包含报告引用的Git提交。显式请求词:反思提交、智能提交、生成调试报告、commit with reflection。

لغة النص الأصلي: الصينية

documentation-lookup

Use when the user needs current library, framework, or API documentation and version-specific code examples.

لغة النص الأصلي: الإنجليزية

knowledge-steward

AI工作经验知识库管理。适用于用户明确要求'保存到Obsidian'、'记录这个'、'save this insight'、'memo this'、'capture this'等知识沉淀场景。将对话中的提示词、模式、问题修复、想法和效率优化保存到Obsidian知识库，并自动同步到GitHub。

لغة النص الأصلي: الصينية

citation-management

Comprehensive citation management for academic research. Resolve bibliographic identifiers, extract accurate metadata, validate citations, deduplicate references, and generate properly formatted BibTeX entries. This skill should be used when you need to…

لغة النص الأصلي: الإنجليزية

literature-review

Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). This skill should be used when conducting systematic literature reviews, meta-analyses, research synthesis, or…

لغة النص الأصلي: الإنجليزية

claude-skills

Claude Skills meta-skill: extract domain material (docs/APIs/code/specs) into a reusable Skill (SKILL.md + references/scripts/assets), and refactor existing Skills for clarity, activation reliability, and quality gates.

لغة النص الأصلي: الإنجليزية

designing-experiments

Design experiments and quasi-experiments before analysis. Use when choosing study design, treatment/control structure, outcomes, assumptions, validation plans after scientific experiment failure, or which of DiD, ITS, synthetic control, or regression…

لغة النص الأصلي: الإنجليزية

hypothesis-generation

Structured hypothesis formulation from observations. Use when you have experimental observations or data and need to formulate testable hypotheses with predictions, propose mechanisms, and design experiments to test them. Also owns explicit HypoGeniC-style or…

لغة النص الأصلي: الإنجليزية

metric-calculator

Compute well-defined metrics from existing formulas, datasets, or test outputs. Use as an explicit/manual helper when the metric definition is already known, not for choosing the overall analysis owner or dashboard strategy.

لغة النص الأصلي: الإنجليزية

scientific-brainstorming

Open-ended scientific ideation partner. Use for research gaps, mechanism exploration, interdisciplinary connections, assumptions, possible research directions, and lightweight literature matrix or A+B paper-combination idea mapping. For structured testable…

لغة النص الأصلي: الإنجليزية

scikit-learn

Machine learning in Python with scikit-learn. Use when working with supervised learning (classification, regression), unsupervised learning (clustering, dimensionality reduction), model evaluation, hyperparameter tuning, preprocessing, or building ML…

لغة النص الأصلي: الإنجليزية

bio-database-evidence

Unified biological database evidence owner. Use for gene annotation, variant clinical significance, cancer mutation evidence, GWAS trait associations, pathway mapping, target-disease evidence, protein structures, protein interaction networks, reference…

لغة النص الأصلي: الإنجليزية

biopython

Primary retained Python toolkit for molecular biology sequence work. Preferred for sequence manipulation, FASTA/FASTQ/GenBank parsing, Bio.Entrez, BLAST workflows, alignments, structures, and phylogenetics. For biological database evidence lookup, use…

لغة النص الأصلي: الإنجليزية

rdkit

Core cheminformatics toolkit for SMILES/SDF/InChI parsing, descriptors (MW, LogP, TPSA), fingerprints, ECFP/Morgan fingerprints, substructure search, 2D/3D generation, similarity, reactions, and datamol-style molecule standardization when no separate wrapper…

لغة النص الأصلي: الإنجليزية

scanpy

Single-cell RNA-seq and retained scverse workflow owner. Load .h5ad/10X data, manage AnnData metadata, plan scVI/scANVI batch-correction workflows, QC, normalization, PCA/UMAP/t-SNE, Leiden clustering, marker genes, cell type annotation, trajectory, for…

لغة النص الأصلي: الإنجليزية

performing-causal-analysis

Estimate causal effects from existing data. Use when fitting or interpreting DiD, ITS, synthetic control, regression discontinuity, or other treatment-effect analyses, including robustness checks and counterfactual plots. For choosing a study design before…

لغة النص الأصلي: الإنجليزية

research-grants

Write competitive research proposals for NSF, NIH, DOE, DARPA, and Taiwan NSTC. Agency-specific formatting, review criteria, budget preparation, broader impacts, significance statements, innovation narratives, and compliance with submission requirements.

لغة النص الأصلي: الإنجليزية

fluidsim

Framework for computational fluid dynamics simulations using Python. Use when running fluid dynamics simulations including Navier-Stokes equations (2D/3D), shallow water equations, stratified flows, or when analyzing turbulence, vortex dynamics, or…

لغة النص الأصلي: الإنجليزية

matchms

Spectral similarity and compound identification for metabolomics. Use for comparing mass spectra, computing similarity scores (cosine, modified cosine), and identifying unknown compounds from spectral libraries. Best for metabolite identification, spectral…

لغة النص الأصلي: الإنجليزية

matlab

MATLAB and GNU Octave numerical computing for matrix operations, data analysis, visualization, and scientific computing. Use when writing MATLAB/Octave scripts for linear algebra, signal processing, image processing, differential equations, optimization,…

لغة النص الأصلي: الإنجليزية

neuropixels-analysis

Neuropixels neural recording analysis. Load SpikeGLX/OpenEphys data, preprocess, motion correction, Kilosort4 spike sorting, quality metrics, Allen/IBL curation, AI-assisted visual analysis, for Neuropixels 1.0/2.0 extracellular electrophysiology. Use when…

لغة النص الأصلي: الإنجليزية

pymc-bayesian-modeling

Bayesian modeling with PyMC. Build hierarchical models, MCMC (NUTS), variational inference, LOO/WAIC comparison, posterior checks, for probabilistic programming and inference.

لغة النص الأصلي: الإنجليزية

pymoo

Multi-objective optimization framework. NSGA-II, NSGA-III, MOEA/D, Pareto fronts, constraint handling, benchmarks (ZDT, DTLZ), for engineering design and optimization problems.

لغة النص الأصلي: الإنجليزية

rowan

Cloud-based quantum chemistry platform with Python API. Preferred for computational chemistry workflows including pKa prediction, geometry optimization, conformer searching, molecular property calculations, protein-ligand docking (AutoDock Vina), and AI…

لغة النص الأصلي: الإنجليزية

simpy

Process-based discrete-event simulation framework in Python. Use this skill when building simulations of systems with processes, queues, resources, and time-based events such as manufacturing systems, service operations, network traffic, logistics, or any…

لغة النص الأصلي: الإنجليزية

stable-baselines3

Production-ready reinforcement learning algorithms (PPO, SAC, DQN, TD3, DDPG, A2C) with scikit-learn-like API. Use for standard RL experiments, quick prototyping, and well-documented algorithm implementations. Best for single-agent RL with Gymnasium…

لغة النص الأصلي: الإنجليزية

timesfm-forecasting

Zero-shot time series forecasting with Google's TimesFM foundation model. Use this skill when forecasting ANY univariate time series — sales, sensor readings, stock prices, energy demand, patient vitals, weather, or scientific measurements — without training…

لغة النص الأصلي: الإنجليزية

torch-geometric

Graph Neural Networks (PyG). Node/graph classification, link prediction, GCN, GAT, GraphSAGE, heterogeneous graphs, molecular property prediction, for geometric deep learning.

لغة النص الأصلي: الإنجليزية

histolab

Lightweight WSI tile extraction and preprocessing. Use for basic slide processing tissue detection, tile extraction, stain normalization for H&E images. Best for simple pipelines, dataset preparation, quick tile-based analysis. For advanced spatial…

لغة النص الأصلي: الإنجليزية

imaging-data-commons

Query and download public cancer imaging data from NCI Imaging Data Commons using idc-index. Use for accessing large-scale radiology (CT, MR, PET) and pathology datasets for AI training or research. No authentication required. Query by metadata, visualize in…

لغة النص الأصلي: الإنجليزية

omero-integration

Microscopy data management platform. Access images via Python, retrieve datasets, analyze pixels, manage ROIs/annotations, batch processing, for high-content screening and microscopy workflows.

لغة النص الأصلي: الإنجليزية

pathml

Computational pathology toolkit for analyzing whole-slide images (WSI) and multiparametric imaging data. Use this skill when working with histopathology slides, H&E stained images, multiplex immunofluorescence (CODEX, Vectra), spatial proteomics, nucleus…

لغة النص الأصلي: الإنجليزية

pydicom

Python library for working with DICOM (Digital Imaging and Communications in Medicine) files. Use this skill when reading, writing, or modifying medical imaging data in DICOM format, extracting pixel data from medical images (CT, MRI, X-ray, ultrasound),…

لغة النص الأصلي: الإنجليزية

datacommons-client

Work with Data Commons, a platform providing programmatic access to public statistical data from global sources. Use this skill when working with demographic data, economic indicators, health statistics, environmental data, or any public datasets available…

لغة النص الأصلي: الإنجليزية

market-research-reports

Generate comprehensive market research reports and industry/competitive analysis in the style of top consulting firms. Use for market sizing, competitive landscape, market entry, investment thesis, strategic recommendations, and consulting-style business…

لغة النص الأصلي: الإنجليزية

code-reviewer

Default code-quality route for broad code review, PR review, maintainability, correctness, and regression-risk checks. Do not use as the primary route for dedicated OWASP/security audits, review-feedback handling, completion verification, AI-code cleanup, or…

لغة النص الأصلي: الإنجليزية

error-resolver

Legacy error-resolution reference archive retained for migration. Do not route user tasks here; use systematic-debugging for active bug, stack-trace, and root-cause work.

لغة النص الأصلي: الإنجليزية

spec-kit-vibe-compat

Compatibility router for /speckit.* workflows into /vibe-first Codex execution.

لغة النص الأصلي: الإنجليزية