name	upgrade-bootstrap
description	Walk through upgrading Bootstrap and/or Bootswatch dependencies in the bslib R package. Use when the user asks to upgrade Bootstrap, update Bootstrap, bump the Bootstrap version, upgrade Bootswatch, or update vendored web dependencies in bslib. Covers version pinning, running the build pipeline, diagnosing and fixing rejected patches, and verifying the result.

Upgrade Bootstrap / Bootswatch in bslib

Architecture

bslib vendors Bootstrap and Bootswatch via npm, then applies a series of patch files that add bslib-specific features (semantic color functions, Shiny form support, navbar variables, etc.). The build pipeline is:

yarn install downloads fresh upstream packages into inst/node_modules/
tools/yarn_install.R moves them to inst/lib/, adds vendor prefixes, validates prefixes, downsizes vendor libraries, applies all patches, and generates precompiled CSS
tools/main.R runs yarn_install.R plus additional asset scripts (fonts, gfont info, variables article, component sass)

Version pins live in inst/package.json as npm aliases:

"bs5": "npm:bootstrap@5.3.8",
"bsw5": "npm:bootswatch@5.3.8",

Patches live in tools/patches/ and are applied alphabetically by filename via git apply --reject --whitespace=fix. Later patches depend on earlier ones (especially for shared files like _variables.scss).

Upgrade Workflow

Step 1: Update version pins

Edit inst/package.json to bump the target version(s). Only change the versions being upgraded; leave others untouched.

Step 2: Run the build pipeline

Rscript tools/yarn_install.R

This script will stop with an error if any patch fails to apply. When it fails, proceed to Step 3 to fix patches, then re-run from scratch.

Step 3: Fix rejected patches

When patches fail, follow the systematic approach described in references/patch-fixing-guide.md.

Key points:

Save clean upstream state before any patch application
Test all patches sequentially to identify every failure (not just the first)
Fix patches in parallel when possible (use subagents)
Re-run yarn_install.R from scratch to verify the full sequence

Step 4: Verify the build

After yarn_install.R completes successfully, confirm:

R/versions.R shows the new version (auto-generated by the script)
No .rej files exist in the working tree
Vendor prefix validation passed (part of yarn_install.R)
Precompiled CSS was generated in inst/css-precompiled/

Step 5: Check for new/removed Bootswatch themes

List themes in inst/lib/bsw5/dist/ and compare with what existed before. bootswatch_themes() dynamically reads directory names, so new themes are picked up automatically. Check R/bs-theme-preset-bootswatch.R for any hardcoded theme references that might need updating (e.g., bs3compat_navbar_defaults() has a hardcoded BS3 theme list).

Step 6: Check for redundant patches

If all patches applied cleanly, none are redundant. A patch whose changes were upstreamed would fail to apply because the old-state lines wouldn't match. Only investigate redundancy if a patch was already rejected.

Step 7: Report upstream changes and patch edits

Produce a changelog report for the user covering both Bootstrap and Bootswatch changes between the old and new versions. Research the changelogs (GitHub releases, release blog posts, and/or the CHANGELOG.md in the upstream repos) and organize changes into three tiers based on likely impact to bslib and Shiny apps:

Critical — Changes that directly affect bslib's patched files or Shiny component rendering. Examples: Sass variable renames/removals, color-contrast() algorithm changes, form element markup restructuring, navbar API changes, dark mode variable changes.

Notable — Changes that affect commonly used Bootstrap features in Shiny apps but don't directly conflict with bslib patches. Examples: new utility classes, component behavior changes, accessibility improvements, new CSS custom properties, JavaScript API changes for components used in Shiny.

Minor — Bug fixes, docs changes, or changes to features rarely used in Shiny contexts. Examples: RTL fixes, print stylesheet changes, Offcanvas edge cases, carousel fixes.

After the categorized changelog, include a summary of all patch edits that were required during Step 3, listing each modified patch file with a short description of what changed and why (e.g., "updated context for new $nav-underline-link-active-color variable added upstream").

Also include any new/removed Bootswatch themes (from Step 5) and any redundant patches identified (from Step 6) in this report.

Step 8: Run the full asset pipeline (if not already done)

Rscript tools/main.R

This runs yarn_install.R plus download_preset_fonts.R, update_gfont_info.R, expand_variables_article_template.R, and compile_component_sass.R.

Step 9: Run tests and checks

devtools::test()
devtools::check()

Expect existing snapshot tests to potentially need updating if HTML serialization changed (whitespace-only diffs are safe to accept with testthat::snapshot_accept()). Focus on whether any new failures appear that are related to the Bootstrap upgrade.

Step 10: Visual verification

Test Shiny apps and bslib examples with:

Default Bootstrap 5 theme
Dark Bootswatch themes (Darkly, Cyborg, Slate, Superhero)
Light Bootswatch themes (Flatly, Minty, Lux)
Shiny form elements (checkbox, radio, selectize, sliders)
Navbar styling

Key Files

File	Role
`inst/package.json`	npm version pins
`R/versions.R`	Auto-generated version constants
`tools/yarn_install.R`	Main build script (~760 lines)
`tools/main.R`	Full asset pipeline runner
`tools/patches/*.patch`	~59 patch files applied to vendored sources
`inst/lib/bs5/`	Vendored Bootstrap 5 SCSS (patched)
`inst/lib/bsw5/`	Vendored Bootswatch 5 SCSS (patched)
`inst/css-precompiled/`	Pre-compiled CSS output
`R/bs-theme-preset-bootswatch.R`	Theme discovery and configuration

Common Upstream Changes That Break Patches

Variable value changes (e.g., $table-color: $white to initial)
New variables added between existing ones (context line shifts)
Removed style blocks (e.g., .nav-item.open removed)
Stylelint comment additions (e.g., /* stylelint-disable-line */)
Sass declaration reordering for Dart Sass compatibility
color-contrast() function changes (WCAG compliance updates)

name	upgrade-bootstrap
description	Walk through upgrading Bootstrap and/or Bootswatch dependencies in the bslib R package. Use when the user asks to upgrade Bootstrap, update Bootstrap, bump the Bootstrap version, upgrade Bootswatch, or update vendored web dependencies in bslib. Covers version pinning, running the build pipeline, diagnosing and fixing rejected patches, and verifying the result.