Hypo-Research

Aggregate Codex skill bundle for academic literature search, screening, citation traversal, research ideation, experiment planning, LaTeX lint/fix, bibliography verification, polishing, translation, and one-command paper checks.

Run a multi-persona simulated academic review for a LaTeX or PDF paper. Parses paper structure, prepares reviewer-specific prompts, then guides independent reviews, AC meta-review, revision roadmap, and consistency checks.

Aggregate Codex skill bundle for academic literature search, screening, citation traversal, research ideation, experiment planning, LaTeX lint/fix, bibliography verification, polishing, translation, and one-command paper checks.

Run the full writing-quality pipeline for a LaTeX paper project: lint, auto-fix preview or apply, citation verification, and aggregated reporting. Use this when the user wants a submission-readiness check, a one-command writing QA pass, or a structured report summarizing lint and bibliography health.

Route a natural-language research request to the right Hypo-Research workflow. Use this when the user is unsure whether they need check, review, read, search, ideation, project management, or another expert skill. Can execute conservative safe paths with explicit inputs.

Run a unified pre-submission check pipeline for LaTeX papers, combining structure/format checks, LaTeX lint, and bibliography verification into one PASS/WARNING/FAIL report. Use when the user is preparing a paper submission, wants CI-friendly preflight checks, or asks for a complete submission-readiness report.

Ingest academic PDFs into structured read artifacts, render outlines, and extract heuristic evidence cards for methods, datasets, figures, and claims. Use this when the user wants to read, summarize, inspect, or deep-read a PDF.

Manage persistent research projects with multi-paper tracking, project context injection, milestones, meeting notes, dashboard, and imports.

Generate academic rebuttal responses by parsing reviewer comments, classifying concerns, choosing response strategies, and drafting a rebuttal letter.

Stress-test a research idea with Socratic questioning across novelty, feasibility, significance, methodology, and assumptions.

Design experiments for a research idea, including baselines, datasets, metrics, ablation studies, experiment matrix, and venue requirements.

Generate research ideas from a direction, paper list, or survey output using quick-win and ambitious strategies with literature-grounded scoring.

Full research pilot workflow, alias Lou Mengmeng, connecting idea generation, challenge, refinement, experiment design, planning, and mentor comments.

Create a research roadmap from an idea and experiment design, including phases, milestones, paper outline, writing schedule, and risk mitigation.

Generate structured academic meeting minutes from ASR transcript files, using a global glossary for terminology correction and built-in meeting templates.

Run a comprehensive multi-source literature survey. Searches Semantic Scholar, OpenAlex, and arXiv in parallel, deduplicates, cross-verifies, and generates a structured report with BibTeX references.

Expand a literature candidate pool by traversing the citation graph from seed papers. Uses Semantic Scholar and OpenAlex APIs to discover citing and cited papers, deduplicates, and outputs results compatible with /hypo-screen. Use this whenever the user wants to find papers connected to known seed papers, asks for citation-network expansion, or needs a Litmaps / Connected-Papers-style discovery step between survey and screening.

Check the structural quality of a LaTeX paper project. Use this whenever the user wants to lint, review, normalize, or auto-fix LaTeX structure issues: labels, refs, floats, citations, table environments, spacing, BibTeX fields, title case, or abbreviation expansion. Run the stats extractor first, let the script collect objective facts, then apply Agent judgment for abbreviation and title-case recommendations, and optionally patch auto-fixable issues.

Polish academic English in LaTeX papers. Use this whenever the user wants to improve wording, clarity, concision, sentence flow, paragraph transitions, or section-level writing quality in a paper, rebuttal, abstract, or technical draft. Run the stats extractor first, let it surface long sentences and repetitive openings, then have the Agent perform the actual language rewrite.

Screen and classify papers from a Hypo-Research survey output directory using user-defined rules. Generates a classification report with per-paper labels, category counts, and an analysis summary.

Run a fast literature lookup for a single query across the configured sources and summarize the top results for the agent.

Maintain bilingual Chinese-English LaTeX drafts. Use this whenever the user wants to keep Chinese comment summaries aligned with English paper text, generate missing English from Chinese comments, generate missing Chinese summaries from English paragraphs, or audit bilingual sync in a paper draft. Run the stats extractor first to get paragraph pairs and orphan paragraphs, then let the Agent produce the actual translation or sync judgment.

Verify whether BibTeX references are real and whether their metadata is correct. Use this whenever the user wants to validate a .bib file, detect hallucinated references, check DOI/title/year/venue/author consistency, or confirm that cited papers actually exist on Semantic Scholar and OpenAlex. Run the verification script first to collect objective metadata evidence, then let the Agent judge whether citation context in the .tex file accurately describes the paper.