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Flag ambiguous sequence or reference regions.
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| name | flag_ambiguous_sequence_regions |
| title | Flag Ambiguous Sequence Regions |
| description | Flag ambiguous sequence or reference regions. |
Use this skill when reviewing reference sequence quality. Look for ambiguous bases, long N runs, unexpected contig names, unusual GC content, and regions that may complicate mapping or variant interpretation.
Report locations or contigs exactly when available.
