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Fills all [FILL:] placeholders across the template to initialize a new research project. Use when setting up a freshly cloned project.
Install with Codex or Claude Copy this prompt, paste it into Codex, Claude, or another assistant, and let it review the skill page and install it for you.
Based on SOC occupation classification
Scaffold a Quarto analysis notebook (generic or method-specific — DiD, IV, RDD, LASSO, Panel FE), register it in _quarto.yml, apply publication-quality figure styling, and generate dataset codebooks. Use when starting a new analysis notebook.
Manage the project's literature workflow — ideate research questions, run structured literature reviews, add citations to references.bib, write annotation notes in references/, and audit citation integrity. Use for any bibliography or literature task.
Audit a Quarto manuscript or a single notebook — freeze freshness, data-path existence, citation integrity, figure/table export presence, placeholder and anonymization checks. Produces a scored review report under notes/. Read-only — never modifies notebooks, data, or the manuscript.
Build publication-quality regression and robustness tables from notebook estimation output, exported to tables/ as CSV + Markdown + LaTeX. Use when creating a results table.
Draft and revise manuscript prose for index.qmd — sections, the abstract, regression-result interpretation, and referee responses. Use when writing or revising the manuscript.
Reads the manuscript and notebooks to generate a structured abstract. Use when writing or updating the abstract.
| name | init |
| description | Fills all [FILL:] placeholders across the template to initialize a new research project. Use when setting up a freshly cloned project. |
| disable-model-invocation | true |
| allowed-tools | Bash, Read, Write, Edit, Glob, Grep |
| version | 1.0.0 |
| workflow_stage | setup |
| tags | ["setup","initialization","template"] |
Fill in all [FILL:] placeholders across the template to set up a new research project.
Scan all tracked files for [FILL: patterns and group them by file:
grep -rn "\[FILL:" --include="*.md" --include="*.qmd" --include="*.toml" --include="*.tex" --include="*.yml" .
Report how many placeholders exist and in which files.
Ask the user for project information:
index.qmd, README.md, CLAUDE.md, pyproject.toml)index.qmd)index.qmd)index.qmd)CLAUDE.md: Idea / Data collection / Analysis / Writing / Revision)CLAUDE.md and README.md)README.md)pyproject.toml name field, e.g., regional-gdp-study)Apply the values to each file:
index.qmd — title, subtitle, authors (full YAML array with affiliations/ORCID/email), abstract, keywordsREADME.md — project title, description paragraph, data section, repository URL, Quick Start clone URLCLAUDE.md — Project Context table: title, authors, stage, data sourcepyproject.toml — name, description, authors_quarto.yml — no [FILL:] placeholders by default, but verifytemplates/chadManuscript/manuscript.tex — author names and keywordsAfter applying all values, re-scan for remaining [FILL:] placeholders:
grep -rn "\[FILL:" --include="*.md" --include="*.qmd" --include="*.toml" --include="*.tex" --include="*.yml" .
Report how many remain and where (some are expected in section bodies like "Describe the data...").
Run bash scripts/render.sh to regenerate latex/index.tex with the real content.
Report a summary: files updated, placeholders filled, placeholders remaining, render status.