Sub-skill of nextflow-pipelines: Step 0: Acquire Data (GEO/SRA Only).
Skills in this repository
vamseeachanta/workspace-hub - Page 57
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Sub-skill of nextflow-pipelines: Step 2: Select Pipeline.
Sub-skill of nextflow-pipelines: Step 3: Run Test Profile.
Sub-skill of nextflow-pipelines: Workflow Checklist.
Sub-skill of scientific-problem-selection: Foundational Reference.
Sub-skill of scientific-problem-selection: Getting Started.
Sub-skill of scientific-problem-selection: Graduate Students (Primary Audience) (+3).
Sub-skill of scientific-problem-selection: Immediate (After Completing Workflow) (+2).
Sub-skill of scientific-problem-selection: Initial Prompt (+3).
Sub-skill of scientific-problem-selection: Key Design Principles.
Sub-skill of scientific-problem-selection: Reference Materials.
Sub-skill of scientific-problem-selection: Skill Workflow.
Sub-skill of scientific-problem-selection: The 9 Skills Overview.
Sub-skill of scientific-problem-selection: The Central Insight (+5).
Sub-skill of agent-teams: 1. Create team (+5).
Sub-skill of agent-teams: Activation.
Sub-skill of agent-teams: Agent Types for Common Tasks.
Sub-skill of agent-teams: Core Constraint.
Sub-skill of agent-teams: Decision Matrix: Team vs Sequential.
Sub-skill of agent-teams: DM (default — always prefer) (+2).
Sub-skill of agent-teams: Idle State.
Sub-skill of agent-teams: Related.
Sub-skill of agent-teams: Subagent startup convention (+2).
Sub-skill of agent-teams: Work Queue Integration.
Sub-skill of agent-teams: Workspace Work Profile (Updated 2026-03-10).
Sub-skill of clean-code: Dead Code Identification and Removal.
Sub-skill of clean-code: File Size Decision Tree.
Sub-skill of clean-code: Git Plumbing for Repos with Large Pack Files (+1).
Sub-skill of clean-code: God Object Detection.
Sub-skill of clean-code: Hard Limits (Zero-Tolerance).
Sub-skill of clean-code: Naming Rules (Enforcement).
Sub-skill of clean-code: Pattern 1: Responsibility Split (most common) (+5).
Sub-skill of clean-code: Pre-commit Integration.
Sub-skill of clean-code: Quick Scan Commands.
Sub-skill of clean-code: See Also.
Sub-skill of clean-code: Step 1: API Compatibility Check (MANDATORY before writing shims) (+2).
Sub-skill of clean-code: Top P1 Candidates (2026-02-25 audit).
Source text: Undetermined
Sub-skill of improve: Creating New Skills (+3).
Sub-skill of improve: Decision Logic (Scoring).
Sub-skill of improve: Integration.