bioskills-batch-integration

name	bioskills-batch-integration
description	Integrate multiple scRNA-seq batches to remove batch effects while preserving biological variation, using Harmony, scVI, Seurat anchors, or fastMNN.
domain	single-cell
primary_tool	harmony
methods	["harmony","scvi","scvi-tools","scanpy","seurat","fastmnn","batchelor","scikit-learn"]
macro_tags	["batch-integration","batch-correction","multi-sample","workflow"]
micro_tags	["harmony","scvi","scanvi","seurat","cca","rpca","fastmnn","lisi","silhouette","leiden","umap","pca","normalization","hvg","qc"]
source	bioskills-batch-integration
status	active
enabled	true

Bioskills Batch Integration