bioskills

name	bioskills
description	Installs 425 bioinformatics skills covering sequence analysis, RNA-seq, single-cell, variant calling, metagenomics, structural biology, and 56 more categories. Use when setting up bioinformatics capabilities or when a bioinformatics task requires specialized skills not yet installed.
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bioSkills Installer

Meta-skill that installs the full bioSkills collection (425 skills across 62 categories) for bioinformatics analysis.

Installation

Run the bundled install script to download and install all bioSkills:

bash scripts/install-bioskills.sh

Or install only specific categories:

bash scripts/install-bioskills.sh --categories "single-cell,variant-calling,differential-expression"

What Gets Installed

Category Group	Categories	Skills
Sequence & Alignment	sequence-io, sequence-manipulation, alignment, alignment-files, database-access	40
Read Processing	read-qc, read-alignment	11
RNA-seq & Expression	differential-expression, rna-quantification, expression-matrix	14
Single-Cell & Spatial	single-cell, spatial-transcriptomics	25