graphld-usage

name	graphld-usage
description	Use when running, debugging, or documenting GraphLD analyses, CLI commands, APIs, file formats, or small workflow examples.

GraphLD Usage

Use this skill for GraphLD analysis workflows. For environment setup, use graphld-setup.

Start with CLI help:

uv run graphld -h
uv run estest --help

Use data/test/ for small fixtures only after checking that the files are present and non-empty.

Read the relevant reference:

• references/graphreml.md: graphREML, LDGM metadata, annotations, precision operations.
• references/score-test.md: estest workflows and HDF5 score-stat files.
• references/other-cli.md: BLUP, clump, simulate, and surrogates.
• references/file-formats.md: supported input formats and fixture conventions.