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PubMed biomedical literature search. Use for finding papers, clinical evidence, and research.
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Basado en la clasificación ocupacional SOC
Shared operational contract for all MedSci agents: sequential execution, planning phase, retry limits, evidence standards.
Isolated exploratory code execution with medsci-sandbox tools. Use when analysis requires custom code beyond existing domain MCP tools.
AlphaFold DB for predicted protein structures and pLDDT confidence scores
Molecular biology toolkit. Use for FASTA parsing, sequence analysis, and translation.
ChEMBL database access for bioactivity data and target search
Datamol for molecular manipulation, SMILES processing, and cheminformatics
| name | pubmed |
| description | PubMed biomedical literature search. Use for finding papers, clinical evidence, and research. |
search_pubmed(query) — Search with Boolean/MeSH supportfetch_abstract(pmid) — Get full abstract and MeSH terms"Breast Neoplasms"[MeSH]cancer AND immunotherapy NOT review[Title], [Author], [Journal]"2024/01/01"[Date - Publication] : "2024/12/31"[Date - Publication]randomized controlled trial[pt] or meta-analysis[pt]search_openalex for broader cross-disciplinary searchsearch_clinical_trials for active/completed trials