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Sync non-git data between existing git worktrees. Supports seed, diff, and apply modes using explicit --from/--to endpoints. Does not create/remove worktrees or manage sandbox settings.
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Basé sur la classification professionnelle SOC
| name | worktree-data-sync |
| description | Sync non-git data between existing git worktrees. Supports seed, diff, and apply modes using explicit --from/--to endpoints. Does not create/remove worktrees or manage sandbox settings. |
| user-invocable | true |
Sync non-git files between existing git worktrees.
Activate this skill when the request is about:
Do not use this skill for:
Single CLI entrypoint:
python3 <skill-dir>/scripts/sync_worktree_data.py --to <worktree-path> --mode <seed|diff|apply> [OPTIONS]
Replace <skill-dir> with the directory that contains this SKILL.md.
--to is required (destination worktree)--from is optional (source worktree)--from is omitted, source defaults to the main worktree--mode seedMaterialize missing managed files in destination from source.
Rules:
Optional: --seed-sync-mode <auto|force-symlink|force-cow> (default: auto)
auto: preserve current per-path behavior (symlink-only roots get symlinks, others get copies)force-symlink: create top-level symlinks for all managed roots when the destination path does not already exist; conflicting paths are skippedforce-cow: copy/COW all managed roots, including symlink-only annotated paths--seed-sync-mode is only valid with --mode seed; the CLI rejects it for other modes.
--mode diffReport source-to-destination differences for managed files.
Statuses:
new: exists in source but missing in destinationmodified: exists in both but differsunchanged: identical (only shown with --include-unmodified)Output options:
--json), compatible with apply mode--mode applyExecute sync actions for selected changes.
Actions:
--action overwrite: copy source file to destination path--action rename: copy source file to destination with suffixSelection options:
--from-json <file> from prior diff output--files <path...> for explicit relative pathsnew + modified)No delete/discard action is provided.
Discovery is stateless and source-driven. Managed roots come from:
git ls-files --others --ignored --exclude-standard --directory.gitignore symlink-only annotationsAnnotate a path as symlink-only by adding a duplicate line with the tag comment:
Data/
Data/ # data-sync:symlink
The first line is the actual gitignore rule; the second is the annotation the discovery script parses.
Legacy tag # worktree:symlink is also supported.
Symlink-only roots are symlinked in seed auto mode and excluded from diff/apply actions.
# Seed from main worktree into destination
python3 <skill-dir>/scripts/sync_worktree_data.py \
--to ../MyRepo-feature \
--mode seed
# Seed using top-level symlinks for all managed roots
python3 <skill-dir>/scripts/sync_worktree_data.py \
--to ../MyRepo-feature \
--mode seed \
--seed-sync-mode force-symlink
# Seed using copy/COW for all managed roots (including symlink-only)
python3 <skill-dir>/scripts/sync_worktree_data.py \
--to ../MyRepo-feature \
--mode seed \
--seed-sync-mode force-cow
# Diff explicit source -> destination
python3 <skill-dir>/scripts/sync_worktree_data.py \
--from ../MyRepo-expA \
--to ../MyRepo-expB \
--mode diff --json
# Apply overwrite using diff json
python3 <skill-dir>/scripts/sync_worktree_data.py \
--to ../MyRepo-expB \
--mode apply \
--from-json /tmp/changes.json \
--action overwrite
# Apply rename for explicit files
python3 <skill-dir>/scripts/sync_worktree_data.py \
--from ../MyRepo-expA \
--to ../MyRepo-expB \
--mode apply \
--files output/result.csv notes/draft.md \
--action rename \
--suffix _from_expA
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Comprehensive academic paper review covering mathematical correctness, writing clarity, consistency, argumentation, proofreading, and citations. Use when user asks to 'review draft', 'check paper', 'proofread manuscript', or requests feedback on academic writing. Can also verify code-paper consistency when source code is available. Defaults to comprehensive + standard review, with optional deep parallel review when Codex multi-agent support is available.
Convert PDFs to Markdown using Mistral OCR API with image extraction. Use when you need to extract structured text and images from PDFs, especially for scanned documents or documents with complex formatting. Outputs Markdown with embedded images.
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Create formal, fact-checked work journal entries after completing analysis work. Use when user asks to "summarize work", "document results", or "create work journal entry". Ensures code is committed, copies figures to attachments, and creates objective summaries with mandatory citations plus a report-quality verification pass. For quick reports without fact-checking, use the `report-in-markdown` skill.