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GLLVM.jl
GLLVM.jl contient 8 skills collectées depuis itchyshin, avec une couverture métier par dépôt et des pages de détail sur le site.
Skills dans ce dépôt
Add a new non-Gaussian response family to GLLVM.jl with Laplace-approximated likelihood, link functions, Julia multiple-dispatch wiring, ADEMP recovery test, and documentation. Use when extending Phase 3 (non-Gaussian families) beyond the Gaussian-only v0.1.0 pilot.
Add ADEMP-style simulation-based parameter-recovery tests for GLLVM.jl models using Test.jl and StableRNGs.
Mandatory closure routine for every completed GLLVM.jl task or phase. Writes a compact report to docs/dev-log/after-task/YYYY-MM-DD-<task>.md covering goal, files changed, tests added, benchmark numbers, R-parity verdict (vs gllvmTMB), JET/Allocs/Aqua verdicts, Rose audit verdict, remaining risks, and the next command. Enforces the drmTMB-grade Definition of Done the maintainer asked for: implementation + tests + docs + examples + check-log + after-task audit + Rose audit verdict.
Audit and improve GLLVM.jl figures, Documenter.jl pages, simulation reports, and CairoMakie recipes when plots look poor, inconsistent, misleading, too sparse, missing raw or replicate data, or need Florence, Rose, Pat, Fisher, and Grace visual QA before being called done.
Review Julia GLLVM likelihoods and parameterizations before merging.
Use when working on Julia package hygiene — Project.toml, exports, Aqua.jl, JET.jl, Allocs.jl, version bumps, Manifest stability.
Review and improve GLLVM.jl prose in README files, tutorials under docs/src/, Documenter pages, after-task reports, release notes, design docs, and manuscript-style text for clarity, concrete claims, stable terminology, citations, and reader fit.
Use when porting/translating any gllvmTMB R-side API to GLLVM.jl, building parity tests under GLLVM_PARITY_TESTS, or auditing API mirror coverage.