tarkg

name	TarKG
description	Query canonical TarKG drug-target triplets. Use when the user asks about drug-target interactions, relation labels, disease/pathway context, or quick lookups for drugs/targets in TarKG.

TarKG Query Skill

Query the canonical packaged TarKG TSV output.

Data

• Path: resources_metadata/dti/TarKG/tarkg.tsv
• Columns: drug, target, relation, disease, pathway

API

Function	Input	Returns
load_tarkg(path)	TSV path	list[dict]
query_entity(entity, rows, limit)	single entity string	dict
query_entities(entities, path, limit)	list of entity strings	list[dict]

query_entity returns keys used by retrieve.py: matched, node_info, outgoing_edges, incoming_edges, candidates.

Usage

Run example.py directly for demo queries against the canonical TSV.