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DisMech rare disease knowledge mapped into Alhazen notebook memory
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Basé sur la classification professionnelle SOC
| name | dismech-notebook |
| description | DisMech rare disease knowledge mapped into Alhazen notebook memory |
| triggers | ["disease mechanism curation","DisMech","rare disease knowledge graph"] |
Maps the Monarch Initiative DisMech rare-disease corpus into the Alhazen notebook's ICE (information-content-entity) model in TypeDB, using the cross-database schema mapper, so disease-mechanism knowledge is browsable and searchable alongside the rest of the notebook.
Triggers: disease mechanism curation, DisMech, rare disease knowledge graph
uv.alhazen-core installed and initialized:
/plugin install alhazen-core@skillful-alhazen then /alhazen-core:init.
(The SessionStart hook auto-runs init and loads this skill's schema.tql.)CLI="${CLAUDE_PLUGIN_ROOT}/dismech_notebook.py"
uv run --project "${CLAUDE_PLUGIN_ROOT}" python "$CLI" stats
uv run --project "${CLAUDE_PLUGIN_ROOT}" python "$CLI" search --query lysosomal
| Command | Description |
|---|---|
stats | Entity counts (diseases, mechanisms, terms) |
list-diseases [--category C] [--limit N] [--offset N] | List diseases |
show-disease --name NAME | Full detail for one disease |
search --query TEXT [--limit N] | Search diseases and mechanisms |
Read USAGE.md for the full reference.