smoke-test

name	smoke-test
description	Smoke test a deployed go-fastapi instance
argument-hint	["instance-url"]
disable-model-invocation	true

Smoke test a deployed go-fastapi instance

You are testing a deployed go-fastapi instance to verify it is responding correctly.

Step 1: Determine the instance URL

If an argument $1 was provided, use it as the base URL. Otherwise, ask the user for the instance URL (e.g. https://go-api-production-2026-03-12.geneontology.org).

Strip any trailing slash from the URL.

Step 2: Run endpoint checks

Use curl to test each endpoint. For each one, check:

• HTTP status code is 200
• Response body contains expected content (where noted)

Run ALL of these checks and collect the results before reporting:

1. OpenAPI docs (liveness check)

curl -s -o /dev/null -w '%{http_code}' {URL}/docs

Expected: 200

2. Prefixes (no parameters, core app test)

curl -s -o /dev/null -w '%{http_code}' '{URL}/api/identifier/prefixes'

Expected: 200

Also check the response contains prefix data:

curl -s '{URL}/api/identifier/prefixes' | python3 -c "import sys,json; d=json.load(sys.stdin); print(len(d))"

Expected: a positive number (the count of prefixes)

3. Ontology lookup (well-known root term)

curl -s -o /dev/null -w '%{http_code}' '{URL}/api/go/GO:0008150'

Expected: 200

Also verify the response contains the expected label:

curl -s '{URL}/api/go/GO:0008150' | python3 -c "import sys,json; d=json.load(sys.stdin); print(d.get('label','MISSING'))"

Expected: "biological_process"

4. Search autocomplete

curl -s -o /dev/null -w '%{http_code}' '{URL}/api/search/entity/autocomplete/biological'

Expected: 200

5. CURIE expansion

curl -s -o /dev/null -w '%{http_code}' '{URL}/api/identifier/prefixes/expand/GO:0008150'

Expected: 200

Step 3: Report results

Present results as a table:

Endpoint	Status	Result
/docs	{code}	PASS/FAIL
/api/identifier/prefixes	{code}	PASS/FAIL
/api/go/GO:0008150	{code}	PASS/FAIL
/api/search/entity/autocomplete/biological	{code}	PASS/FAIL
/api/identifier/prefixes/expand/GO:0008150	{code}	PASS/FAIL

End with a summary: X/5 passed.

If any endpoint fails, suggest debugging steps:

• Check if the instance is reachable: curl -s -o /dev/null -w '%{http_code}' {URL}
• Check container health via SSH: ssh -i /tmp/go-ssh ubuntu@{hostname} then docker inspect --format "{{json .State.Health }}" fastapi
• Check container logs: docker-compose -f /home/ubuntu/stage_dir/docker-compose.yaml logs -f