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Workflow for spatial transcriptomics preprocessing, domain detection, deconvolution, neighborhood analysis, and publication-ready spatial maps.
Codex または Claude でインストール この Prompt をコピーして Codex、Claude、または他のアシスタントに貼り付けると、Skill ページを確認してインストールできます。
SOC 職業分類に基づく
| name | bioclaw-hub-spatial-transcriptomics |
| description | Workflow for spatial transcriptomics preprocessing, domain detection, deconvolution, neighborhood analysis, and publication-ready spatial maps. |
| domain | single-cell |
| primary_tool | scanpy |
| methods | ["scanpy","squidpy","matplotlib","seaborn"] |
| macro_tags | ["workflow","spatial-transcriptomics","domain-detection","deconvolution","neighborhood-analysis","spatial-visualization"] |
| micro_tags | ["scanpy","squidpy","matplotlib","seaborn","spatial-validation","coordinate-check","barcode-alignment","qc","normalization","hvg-selection","spatial-neighbors","pca","leiden","domain-detection","spatial-autocorrelation","marker-genes","deconvolution","cell-type-scoring","spatial-regression","neighborhood-enrichment","interaction-matrix","ripley","ligand-receptor","spatial-plotting","visualization","publication-figures","export","save-results","csv-output","h5ad"] |
| source | bioclaw-hub-spatial-transcriptomics |
| status | active |
| enabled | true |
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