cc-research-project-template

Use when the user wants to convert a project's `paper/` directory into a git submodule pointing at a separate paper repo (typically for Overleaf linking). Handles removing any existing tracked `paper/` content, adding the submodule, writing a standardized README inside the submodule, and updating the parent repo's README.

Clean up PDF filenames by removing spaces, em dashes, and special characters

Create BibTeX entries from PDF papers and add to main.bib

Create a new Python script following project best practices. $ARGUMENTS

Create markdown summaries for PDF papers (creates BibTeX first if needed)

Clean README.md files in the entire repository or specified directories. $ARGUMENTS

Use when updating or replacing the writing style configuration for the paper-writing pipeline, targeting a new venue, audience, or style preferences.

Write LaTeX paper sections based on outline.md using citations from main.bib

Iteratively develop an outline for academic writing

Fetch BibTeX citation from a DOI or paper title and add to .bib file. Use when user provides a DOI, DOI URL, or full paper title and needs a BibTeX entry added to their bibliography, especially when working on academic papers.

Extract text from PDF documents efficiently using poppler's pdftotext. Use when reading academic papers, extracting metadata, or searching PDF content.

Generate a VENV_REPORT.md in the project root summarizing the software environment needed to run the core replication pipeline. Uses pyproject.toml and uv.lock as the source of truth. $ARGUMENTS