| name | RepurposeDrugs-query |
| description | Query the RepurposeDrugs single-agent drug repurposing database. Use whenever the user asks about drug-disease repurposing associations, clinical trial phases for repurposed drugs, or wants to look up any entity (drug name, disease name, NCT ID) in RepurposeDrugs.
|
RepurposeDrugs Query Skill
Search canonical drug-disease repurposing rows. Auto-detects query type by pattern:
| Input Pattern | Detected As | Match Logic |
|---|
34567890 | PMID | exact on pmid |
| anything else | free text | substring on drug OR disease |
API
| Function | Input | Returns |
|---|
load_data(path) | CSV path | list[dict] |
search(rows, entity) | single entity string | list[dict] |
search_batch(rows, entities) | list of entity strings | dict[str, list[dict]] |
summarize(hits, entity) | rows + label | compact text |
to_json(hits) | rows | list[dict] |
Usage
See if __name__ == "__main__" block in example.py for runnable examples.
Data
- Source: RepurposeDrugs normalized full-package output
- URL: https://repurposedrugs.org/
- Local file:
repurposedrugs.csv
- Columns:
drug, disease, score, status, pmid
- Path:
resources_metadata/drug_repurposing/RepurposeDrugs/repurposedrugs.csv
