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Safely deprecate a file following the deprecation protocol.
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SOC 職業分類に基づく
End-of-session shutdown sequence. Saves session log, updates MEMORY.md, updates CLAUDE.md, and stages a git commit.
First-time project setup. Checks prerequisites (Zotero MCP), asks for paper count, generates folder structure, and configures all templates.
Peripheral vision audit — find what the author has become blind to in their results. Run in a FRESH TERMINAL.
Structured debate between two perspectives on a research design decision.
Find gaps in the literature based on existing Obsidian notes. Searches for high-quality articles the author may have missed.
Scaffold a new paper directory with the full structure, CLAUDE.md, and empty templates.
| name | deprecate |
| description | Safely deprecate a file following the deprecation protocol. |
| argument-hint | [filepath] [reason] |
_deprecated/ directory in the same folder if it doesn't exist_deprecated/YYYY-MM-DD_filename.ext_deprecation-log.md in the same directory:
## YYYY-MM-DD · filename.ext
- **Reason**: [provided reason]
- **Deprecated to**: _deprecated/YYYY-MM-DD_filename.ext
- **Session**: [current session log path]
- **Breaking changes**: [any downstream effects]
Before deprecating, check:
data/raw/? → REFUSE (Tier 1: immutable)code/replication/? → REFUSE (Tier 1: immutable)correspondence/? → REFUSE (Tier 1: immutable)session-logs/? → REFUSE (Tier 1: immutable)data/raw/restricted/? → REFUSE (Tier 1: immutable + sensitive)If any check fails, explain why the file cannot be deprecated and suggest alternatives.