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protocol-writer

スター472

フォーク36

更新日2026年4月14日 11:50

Use when `evidence-review` needs an operational protocol before screening and extraction. **Trigger**: protocol, PRISMA, systematic review, inclusion/exclusion, 检索式, 纳入排除. **Use when**: `evidence-review` pipeline 的起点（C1），需要先锁定 protocol 再开始 screening/extraction。 **Skip if**: 不是做 evidence/systematic review（或 protocol 已经锁定且不允许修改）。 **Network**: none. **Guardrail**: protocol 必须包含可执行的检索与筛选规则；需要 HUMAN 签字后才能进入 screening。

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WILLOSCAR

WILLOSCAR/research-units-pipeline-skills

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Protocol Writer

Transforms the review question into an executable evidence-review protocol.

Inputs

Required:

STATUS.md

Optional:

GOAL.md
DECISIONS.md
queries.md

Output

output/PROTOCOL.md

Contract

The protocol must contain:

review questions
source/search specification
inclusion and exclusion clauses with stable IDs
screening plan
extraction schema
bias plan
explicit HUMAN approval note

Script boundary

scripts/run.py should:

read current review context
materialize an operational protocol
write a stable extraction schema and clause IDs

It should not perform retrieval or screening itself.

Acceptance

output/PROTOCOL.md exists
includes extraction schema and protocol clause IDs
is operational enough for downstream screening

Non-goals

writing final synthesis prose
screening candidate papers

このリポジトリの他の Skills

同じリポジトリ

agent-survey-corpus

WILLOSCAR/research-units-pipeline-skills

Download a small corpus of open-access arXiv survey/review PDFs about agentic systems and extract text for style learning. **Trigger**: agent survey corpus, ref corpus, download surveys, 学习综述写法, 下载 survey. **Use when**: you want to study how real agent surveys structure sections (6–8 H2), size subsections, and write evidence-backed comparisons. **Skip if**: you cannot download PDFs (no network) or you don't want local PDF files. **Network**: required. **Guardrail**: only download arXiv PDFs; store under `ref/` and keep large files out of git.

2026-05-30472

global-reviewer

WILLOSCAR/research-units-pipeline-skills

Global consistency review for survey drafts: terminology, cross-section coherence, and scope/citation hygiene. Writes `output/GLOBAL_REVIEW.md` and (optionally) applies safe edits to `output/DRAFT.md`. **Trigger**: global review, consistency check, coherence audit, 术语一致性, 全局回看, 章节呼应, 拷打 writer. **Use when**: Draft exists and you want a final evidence-first coherence pass before LaTeX/PDF. **Skip if**: You are still changing the outline/mapping/notes (do those first), or prose writing is not approved. **Network**: none. **Guardrail**: Do not invent facts or citations; do not add new citation keys; treat missing evidence as a failure signal.

2026-05-30472

literature-engineer

WILLOSCAR/research-units-pipeline-skills

Multi-route literature expansion + metadata normalization for evidence-first surveys. Produces a large candidate pool (`papers/papers_raw.jsonl`, target ≥1200) with stable IDs and provenance, ready for dedupe/rank + citation generation. **Trigger**: evidence collector, literature engineer, 文献扩充, 多路召回, snowballing, cited by, references, 元信息增强, provenance. **Use when**: 需要把候选文献扩充到 ≥1200 篇并补齐可追溯 meta（survey pipeline 的 Stage C1，写作前置 evidence）。 **Skip if**: 已经有高质量 `papers/papers_raw.jsonl`（≥1200 且每条都有稳定标识+来源记录）。 **Network**: 可离线（靠 imports）；雪崩/在线检索需要网络。 **Guardrail**: 不允许编造论文；每条记录必须带稳定标识（arXiv id / DOI / 可信 URL）和 provenance；不写 output/ prose。

2026-05-30472

pdf-text-extractor

WILLOSCAR/research-units-pipeline-skills

Download PDFs (when available) and extract plain text to support full-text evidence, writing `papers/fulltext_index.jsonl` and `papers/fulltext/*.txt`. **Trigger**: PDF download, fulltext, extract text, papers/pdfs, 全文抽取, 下载PDF. **Use when**: `queries.md` 设置 `evidence_mode: fulltext`（或你明确需要全文证据）并希望为 paper notes/claims 提供更强 evidence。 **Skip if**: `evidence_mode: abstract`（默认）；或你不希望进行下载/抽取（成本/权限/时间）。 **Network**: fulltext 下载通常需要网络（除非你手工提供 PDF 缓存在 `papers/pdfs/`）。 **Guardrail**: 缓存下载到 `papers/pdfs/`；默认不覆盖已有抽取文本（除非显式要求重抽）。

2026-05-30472

prose-writer

WILLOSCAR/research-units-pipeline-skills

Write `output/DRAFT.md` (or `output/SNAPSHOT.md`) from an approved outline and evidence packs, using only verified citation keys from `citations/ref.bib`. **Trigger**: write draft, prose writer, snapshot, survey writing, 写综述, 生成草稿, section-by-section drafting. **Use when**: structure is approved (`DECISIONS.md` has `Approve C2`) and evidence packs exist (`outline/subsection_briefs.jsonl`, `outline/evidence_drafts.jsonl`). **Skip if**: approvals are missing, or evidence packs are incomplete / scaffolded (missing-fields, TODO markers). **Network**: none. **Guardrail**: do not invent facts or citations; only cite keys present in `citations/ref.bib`; avoid pipeline-jargon leakage in final prose.

2026-05-30472

schema-normalizer

WILLOSCAR/research-units-pipeline-skills

Normalize cross-skill JSONL interfaces (ids + titles + citation key formats) so downstream skills do not rely on best-effort joins. **Trigger**: schema normalize, jsonl contract, interface drift, join drift, 字段不一致, schema 规范化. **Use when**: you have generated C2-C4 JSONL artifacts (outline/briefs/bindings/packs/anchors) and want deterministic, stable fields before self-loops/writing. **Skip if**: you are not using the survey pipelines, or the workspace already has a fresh PASS `output/SCHEMA_NORMALIZATION_REPORT.md` for the current artifacts. **Network**: none. **Guardrail**: NO PROSE; deterministic transforms only; do not invent evidence/claims; only fill missing ids/titles from `outline/outline.yml`.

2026-05-30472

name

protocol-writer

description

Protocol Writer

Transforms the review question into an executable evidence-review protocol.

Inputs

Required:

STATUS.md

Optional:

GOAL.md
DECISIONS.md
queries.md

Output

output/PROTOCOL.md

Contract

The protocol must contain:

review questions
source/search specification
inclusion and exclusion clauses with stable IDs
screening plan
extraction schema
bias plan
explicit HUMAN approval note

Script boundary

scripts/run.py should:

read current review context
materialize an operational protocol
write a stable extraction schema and clause IDs

It should not perform retrieval or screening itself.

Acceptance

output/PROTOCOL.md exists
includes extraction schema and protocol clause IDs
is operational enough for downstream screening

Non-goals

writing final synthesis prose
screening candidate papers