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Integrate multiple scRNA-seq batches to remove batch effects while preserving biological variation, using Harmony, scVI, Seurat anchors, or fastMNN.
Codex 또는 Claude로 설치 이 Prompt를 복사해 Codex, Claude 또는 다른 어시스턴트에 붙여 넣으면 Skill 페이지를 검토하고 설치를 진행할 수 있습니다.
SOC 직업 분류 기준
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Workflow for paired or integrated single-cell RNA and ATAC analysis with multimodal latent spaces and regulatory interpretation.
Workflow for spatial transcriptomics preprocessing, domain detection, deconvolution, neighborhood analysis, and publication-ready spatial maps.
| name | bioskills-batch-integration |
| description | Integrate multiple scRNA-seq batches to remove batch effects while preserving biological variation, using Harmony, scVI, Seurat anchors, or fastMNN. |
| domain | single-cell |
| primary_tool | harmony |
| methods | ["harmony","scvi","scvi-tools","scanpy","seurat","fastmnn","batchelor","scikit-learn"] |
| macro_tags | ["batch-integration","batch-correction","multi-sample","workflow"] |
| micro_tags | ["harmony","scvi","scanvi","seurat","cca","rpca","fastmnn","lisi","silhouette","leiden","umap","pca","normalization","hvg","qc"] |
| source | bioskills-batch-integration |
| status | active |
| enabled | true |
