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Compute per-sample/per-cell TF motif accessibility deviation z-scores with chromVAR (bulk, Signac, ArchR) and optionally refine TF activity with DecoupleR.
Codex 또는 Claude로 설치 이 Prompt를 복사해 Codex, Claude 또는 다른 어시스턴트에 붙여 넣으면 Skill 페이지를 검토하고 설치를 진행할 수 있습니다.
SOC 직업 분류 기준
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| name | bioskills-motif-deviation |
| description | Compute per-sample/per-cell TF motif accessibility deviation z-scores with chromVAR (bulk, Signac, ArchR) and optionally refine TF activity with DecoupleR. |
| domain | single-cell |
| primary_tool | chromVAR |
| methods | ["chromVAR","motifmatchr","JASPAR2024","TFBSTools","SummarizedExperiment","limma","Signac","ArchR","decoupler"] |
| macro_tags | ["workflow","motif-deviation","chromvar","tf-activity","atac"] |
| micro_tags | ["chromVAR","motifmatchr","JASPAR2024","TFBSTools","SummarizedExperiment","limma","Signac","ArchR","decoupler","qc","filtering","gc-bias","summarized-experiment","motif-matching","jaspar","cisbp","chromvar","background-peaks","deviations","variability","differential","findmarkers","marker-features","tf-activity","consensus","multi-omics"] |
| source | bioskills-motif-deviation |
| status | active |
| enabled | true |
