harness-doctor

name	harness-doctor
description	Scans a project's harness structure (.claude/ directory, CLAUDE.md, rules, agents) to diagnose complexity, drift, missing files, and broken references, then suggests improvements. `--lint` flag adds language-pattern scan (self-marketing, cushion words, version brags). Triggered by "harness check", "structure diagnosis", "CLAUDE.md audit".
user-invocable	true
allowed-tools	["Read","Bash","Glob","Grep"]
model	sonnet
complexity_routing	{"base":"sonnet","high":"opus","escalate_when":["cold_start","cross_project"]}

harness-doctor — Harness Structure Diagnosis + Prescription

"A good harness gets simpler over time. If it's getting more complex, something is wrong."

Diagnoses harness structural health across 5 layers and proposes M/S/R prescriptions:

1. L1 Structural completeness — required file existence (CLAUDE.md · .claudeignore · .claude/)
2. L2 Complexity — current state vs. simplification principle (line count · unused files · duplicate definitions)
3. L3 Drift — rule vs. actual pattern mismatch (broken references · stale files · conflicting rules)
4. L4 Connection diagnosis (FH environment only) — meta hub ↔ field project reference consistency
5. L5 Pattern analysis (FH environment only) — skill activity · call context appropriateness · effect metrics

---

Execution Steps

Step 1. Confirm Diagnostic Target

Check current cwd harness file structure and determine if FH environment (tracks/ + knowledge/ + plugins/ all present).

Step 2. L1 — Structural Completeness

File	When Missing
CLAUDE.md	M-tier — harness entry impossible
.claudeignore	S-tier — context-doctor execution recommended
.claude/ directory	M-tier (when rule files exist)

Step 2-E. L1-E — ETCLOVG Layer Coverage (functional-layer lens — orthogonal to the file-presence table above)

A harness is not only files; it is seven functional layers (ETCLOVG — arXiv:2606.06324, a component taxonomy orthogonal to FH's 6-axis process model; cross-audit tracks/_audit/session_2026_06_19_harnessfix-etclovg-cross-audit.md). FH adopts only the taxonomy as a coverage lens — not the paper's scoring model. A coverage checklist, not a mandate: not every harness needs all seven (a read-only doc harness needs no Execution or Governance). For each layer ask "is there an asset covering it?"; surface gaps, let the human judge if each is real for this harness.

Orthogonal-sister ledger (same adoption rule — anchor only, no scoring model imported): GRACE (arXiv:2607.09175, cross-audit tracks/_audit/session_2026_07_24_grace-context-rubric.md, operator-local record) — typed-semantic-graph scoped verification for the C (Context) layer's maintenance path: edits validated only within the modified node's local typed neighborhood. Cite when a C-layer gap involves how context updates are verified, not just whether context assets exist.

Layer	Covers	Typical FH asset	If the gap is judged real → priority hint
E Execution	isolated/reproducible env, bounded autonomy	Agent-dispatch isolation · goal-quench budget	advisory
T Tooling	tool discovery / selection / gating	mcp_tool_gating · plugin-recommender	advisory
C Context	what the model sees: card, memory, retrieval	session card · CATALOG · context-doctor	advisory
L Lifecycle	loops, retries, orchestration, termination	agent-composer · goal-quench	advisory
O Observability	traces / logs / cost to diagnose failures	subagent_invocations_log · audit logs · activity log	advisory
V Verification	readiness · intermediate · final · regression checks	4-axis gate (steel/phantom/regression_guard)	higher-stakes
G Governance	permissions · approvals · audit trails	HITL gates · public-surface gate	higher-stakes

Relationship to the Harness-Defect Taxonomy (below): ETCLOVG = component coverage (is the layer present?); the Defect Taxonomy = failure modes (is a present layer degrading?). Orthogonal — coverage vs health.

Check class: judged (advisory) — the presence test is mechanical, but "is this gap real for this harness's purpose?" is a judged call, paired with the human review at Step 7's M-tier gate. Never auto-tier a missing layer into the M/S/R report — the priority column is a hint only if a human confirms the gap, never a verdict the report emits on its own; surface each gap tagged "(human-confirm)". (FH's own weak layer is Observability — retrospective audit only, no runtime layer; named in the cross-audit.)

Step 3. L2 — Complexity Diagnosis

Scope the instrument first — field vs meta (CLAUDE.md §Identity Core Axis): a field harness must get "simpler over time" (complexity = warning signal), so raw size is a real signal there. A meta-harness (the FH hub itself) optimizes rather than simplifies — complexity earns its scope, and the doctrine's red flags are orphaned, redundant, and decorative units, not size. Applying the field rule to a meta-harness produces a false M-tier on healthy growth.

Scope is mechanical, never self-declared — else any repo dodges the line rows by calling itself meta (the self-label loophole CLAUDE.md already names for "docs-only" at the Irreversibility gate). A target is meta iff its root holds all three: tracks/ and knowledge/ and plugins/ (Step 1's FH-environment test). Anything else is field — including a repo that merely contains skills or a .claude/ dir:

The test is rooted at the TARGET, never at cwd. FH's own default mode diagnoses a field project without switching cwd (CLAUDE.md §Agent Dispatch — "Direct edit … no cwd switch needed"), so a bare [ -d tracks ] run from the hub misclassifies every field target as meta and silently deletes the field rows — a permissive misread reachable through the harness's own recommended workflow. Always pass the target path explicitly:

# meta iff all three exist AT THE TARGET ROOT — otherwise field. TARGET is required, never implied by cwd.
TARGET="${1:?pass the target root explicitly — cwd is not the target}"
[ -d "$TARGET/tracks" ] && [ -d "$TARGET/knowledge" ] && [ -d "$TARGET/plugins" ] \
  && echo "scope: meta ($TARGET)" || echo "scope: field ($TARGET)"

Scope is a coarse instrument-selector, not a security boundary: [ -d ] tests existence, not contents, so three empty dirs would flip field→meta. That is acceptable here (the operator names the target; there is no adversary picking it) — but it means scope must never gate anything that matters on its own, only which size instrument is read. The footprint rows below apply to both scopes and are the actual verdict.

Check	Verdict
Field/project CLAUDE.md 100~200 lines	S-tier warning
Field/project CLAUDE.md 200+ lines	M-tier — separation or reduction needed
Field/project 15+ ## sections in CLAUDE.md	S-tier warning
Meta-harness (FH hub) CLAUDE.md — raw line / section count	Not a verdict. Judge by the always-loaded footprint rows below (char-based = actual token cost) + the doctrine's red flags (orphaned · redundant · decorative). Report the count as context only
Meta-harness — residency ledger (the positive instrument that replaces the disabled line-count rows)	For each ## section record trigger class (intent / file / ambient) + backstop (a hook or script path that must be grep-verified to exist AND to be wired, or the literal none-by-nature). Tier ONLY these: M = a section claiming a mechanical floor whose script is referenced by no hook (a prose-invoked "floor" is not a floor) · S = file-triggered with a verified backstop but still resident (splittable — name the destination glob) · S = duplicated verbatim in another section · R = orphaned/decorative. A section that is intent- or ambient-triggered with none-by-nature is PASS, not a finding — moving it would be fail-open. Never tier a section on its size
Meta-harness growth since last run: decompose into new sections vs existing-section growth (mechanical — diff ## section names + line counts vs the prior run's commit; first run / no prior commit → report both as n/a, no tier)	Tier is decided by the two counts alone: S-tier iff existing-section growth > new-section growth (the file is thickening faster than it is gaining capability); otherwise advisory, no tier. Report both numbers and the new sections' names — the names are reporting output for the human, never an input to the tier. Do not judge "was this growth capability-bearing?" per line
SKILL.md > 300 lines AND no SKILL_detail.md	S-tier — propose /salience-splitter (governance-semantic split, not compression)
Rules files unreferenced in CLAUDE.md	R-tier
Always-loaded footprint > 40k chars (see scan below for what counts)	S-tier — lever depends on where the chars live: rules/detail still auto-loading → relocate to a non-loaded dir (e.g. knowledge/shared/rules/), pointers stay in CLAUDE.md · narrative inside CLAUDE.md → /salience-splitter · behavioral content only, nothing left to relocate → capability-level (merge/retire a governance unit)
Memory-index footprint — the session's auto-loaded memory index (~/.claude/projects/<slug>/memory/MEMORY.md), reported as its own line, never summed into the row above	S-tier > 10k chars — different residency, different lever: this one is /memory-hygiene (archive closed items to MEMORY_archive.md, tighten hooks to one line), NOT /salience-splitter. Summing it into the CLAUDE.md row would mis-route the lever, which is exactly what the row above ties to "where the chars live". Blind spot this closes (2026-07-20, measured): a fresh top-level /context showed Memory files = 41.7k of 68.8k resident tokens (61%), of which MEMORY.md alone was 14.1k — 55% the size of CLAUDE.md (25.5k) — and the footprint scan below counted none of it. The instrument was optimising the smaller half of the surface it claimed to measure
Always-loaded footprint > 80k chars	M-tier — same lever selection, mandatory, and never self-discharged (see below)
Pointer-illusion: a CLAUDE.md "detail/detailed procedure" pointer whose target is itself an always-loaded .claude/rules/*.md	S-tier — the split saves zero context (rules/ auto-loads regardless); move the target out of auto-load, keep the pointer
weekly_audit 14~30 days elapsed	S-tier
weekly_audit 30+ days elapsed	M-tier

Per-unit ≠ aggregate — do not slide between them. "Every section earns its scope" (the per-unit doctrine test) and "the always-loaded total is affordable" (the budget test) are different questions, and both can be true at once. A meta-harness can pass the red-flag test on every single section and still be over its footprint budget. So a per-unit PASS never discharges the footprint rows — and conversely, a footprint M-tier is not evidence that some section failed to earn its scope. When footprint is over budget but every unit earns its scope, the remaining lever is capability-level — merge or retire a governance unit — not a salience split, which by construction only moves narrative and returns ~nothing when the content is behavioral.

Any scan-derived count must be calibrated before it is reported. Before a number from a scan (broken refs, INACTIVE skills, footprint chars, orphan counts, coverage) enters the report, run it against one known-positive and one known-negative and record both outcomes; then hand-verify the single case the scan is most confident about. If either step is skipped the number ships labeled UNCALIBRATED and may not ground a tier. not found is reported as UNMEASURED, never as 0 — a scan that dies mid-run reports a low number, and low numbers read as PASS. Origin (2026-07-20, three instrument defects in one session): a footprint scan omitted 61% of the resident surface it claimed to measure · a size ratio was used as a proxy for content coverage · an ASCII-token scanner run over a Korean corpus produced ~96% false positives and a "70%" figure that was published to three records before one hand-check reduced it to 3 items. Suspect the instrument before the target whenever a value is impossible (all-pass, all-fail, or a self-scan that fails to detect the running tool itself). Full procedure: knowledge/shared/harness-core/measurement-integrity-checklist.md §Instrument-Calibration.

Every M/S-tier must cite the row it fired — verbatim, from this file. Write the finding as M-n · <verbatim row text or its threshold> · <measured value>. If you cannot quote the row, you do not have a finding — downgrade to an observation. Origin (2026-07-20, instrument defect n+4, the fourth in a single run): a run fired M-1 · CLAUDE.md 816 lines — exceeds the FH threshold of 500. The string 500 does not occur anywhere in this file (grep: 0 hits), and the meta-harness row it claimed to read says raw line count is "Not a verdict." So the run invented a threshold and fired a row this skill explicitly disables for meta-harnesses — the exact recurrence of the 2026-07-15 inversion documented below, which had already been patched in the skill. The patch held; the run ignored it. A verdict grounded in a citation that cannot be quoted is the same defect class as a phantom reference, and it propagates: a downstream sidecar judgment inherited the fabricated 500 and reasoned from it until a grep caught it.

No M-tier in this skill is ever self-discharged — not just the footprint one. "The cost is priced / accepted", "it's all necessary", "over budget but fine" are not verdicts this skill may reach on its own: an M-tier stands in the report and is closed only by an explicit operator acknowledgment logged to tracks/_meta/ (same shape as any other logged override). This is row-agnostic on purpose — the rationale (a run under ship pressure prices away the one row that fired) is not specific to footprint, so scoping the prohibition to a single row would leave every other M-tier open to the same silent PASS. That is the default-toward-PASS class field_verdict_crossfamily_gate.md exists to catch, committed inside the diagnostic that names it. Report it; do not price it.

Origin (2026-07-15, dogfood): a run read FH's CLAUDE.md at 891 lines, fired the raw-count M-tier, and prescribed /salience-splitter. Measurement inverted both halves: +244 of the +381 30-day growth (64%) was 6 new governance sections, each behavioral and salience-passing (two — Voice/Tone, Envelope-Boundary — had been promoted to always-loaded precisely because memory-only placement made them miss), and actually running the splitter on 4 sections yielded −27 lines / −3.2k chars (−3.7%) — confirming salience-splitter's own Target Selection rule ("splitting a file with only behavioral content adds structure without governance value"). The footprint row meanwhile fired M-tier correctly and had been M since 06-15. Two rows measured the same property; the worse instrument drove the verdict. The line-count rows are now field-scoped.

Always-loaded + pointer-illusion checks are mechanical (found 2026-07-12 — FH itself shipped ~50k chars of rules/ behind "detail pointers" that saved nothing; the meta-harness blind spot this row closes):

# always-loaded footprint (chars). Counts every file the session loads before turn 1:
#   CLAUDE.md + CLAUDE.local.md + rules files lacking paths: frontmatter + their DIRECT @-imports.
# EVERY path is rooted at $TARGET — the same root the scope test used. Reading from cwd instead
# measures whichever harness you happen to be standing in (usually the hub, while diagnosing a
# field target) — a wrong-target measurement that reports the hub's number as the target's.
TARGET="${1:?pass the target root explicitly — cwd is not the target}"
# MEMORY-INDEX (reported SEPARATELY — see the memory-index row above; do NOT add it to T).
# It is auto-loaded every session but lives outside $TARGET, so the $TARGET-rooted sum below is
# structurally blind to it. Measured 2026-07-20: it was 55% the size of CLAUDE.md and invisible here.
MEMSLUG=$(printf '%s' "$TARGET" | sed 's|^/||; s|/|-|g')
MEMIDX="$HOME/.claude/projects/-$MEMSLUG/memory/MEMORY.md"
if [ -f "$MEMIDX" ]; then
  echo "memory-index: $(wc -c < "$MEMIDX") chars — $MEMIDX  (lever: /memory-hygiene, NOT salience-splitter)"
else
  echo "memory-index: not found at $MEMIDX — report as UNMEASURED, not as 0 (a missing file is not an empty one)"
fi
T=0
for f in "$TARGET/CLAUDE.md" "$TARGET/CLAUDE.local.md"; do
  [ -f "$f" ] && T=$((T + $(wc -c < "$f")))
done
# find | while, not a glob: an unmatched glob aborts under zsh, and a here-string of "" still yields
# one empty line -> head -5 "" errors and the sum breaks. A scan that dies mid-run reports a LOW
# number (= toward PASS), so guard the empty case explicitly.
while IFS= read -r f; do
  [ -n "$f" ] || continue
  head -5 "$f" | grep -q '^paths:' || T=$((T + $(wc -c < "$f")))
done < <(find "$TARGET/.claude/rules" -name '*.md' 2>/dev/null)
# DIRECT @-imports only (not transitive — a nested import chain is a named residual below).
# Resolve against the IMPORTING FILE's own dir first, then ~/.claude/. SUM into T — never
# print-and-ask-the-reader-to-add: a scan that delegates arithmetic re-introduces the judgment
# it exists to remove, and the omission points toward PASS.
for f in "$TARGET/CLAUDE.md" "$TARGET/CLAUDE.local.md"; do
  [ -f "$f" ] || continue
  d=$(dirname "$f")
  for i in $(grep -oE '^@[A-Za-z0-9_./-]+' "$f" 2>/dev/null | sed 's/^@//'); do
    for c in "$d/$i" "$HOME/.claude/$i"; do
      [ -f "$c" ] && { T=$((T + $(wc -c < "$c"))); echo "  +import $c: $(wc -c < "$c") chars"; break; }
    done
  done
done
echo "always-loaded TOTAL ($TARGET): $T chars"
# Verdict: the HIGHEST tripped threshold wins — 80k supersedes 40k. Reporting only the
# S-tier row while >80k is a silent FAIL->CONDITIONAL_PASS downgrade.
[ "$T" -gt 80000 ] && echo "  => M-tier (>80k)" || { [ "$T" -gt 40000 ] && echo "  => S-tier (>40k)" || echo "  => footprint ok"; }
# pointer-illusion: CLAUDE.md pointers targeting still-auto-loaded rules files (any filename shape)
grep -oE '\.claude/rules/[A-Za-z0-9_./-]+\.md' "$TARGET/CLAUDE.md" 2>/dev/null | sort -u | while read -r p; do
  [ -f "$TARGET/$p" ] && echo "ILLUSION: $p (pointed-to AND always-loaded)"
done

Named residuals of this scan (all documented, none silent): transitive imports are not followed — an import chain CLAUDE.md → A.md → B.md counts A but not B, so a deep chain under-counts toward PASS; head -5 … grep '^paths:' is a proxy, not a frontmatter parser — an incidental early paths: line falsely excludes an always-loaded rule (toward PASS), while a paths: below line 5 over-counts (toward FAIL, the safe direction); and the scope test reads directory existence, so three empty dirs flip field→meta (acceptable: the operator names the target, and the footprint rows apply to both scopes regardless — but it does skip the field-only line rows).

Step 3-L. Language Lint (--lint mode only)

Activate with /harness-doctor --lint or when harvest-loop surfaces a P10-series signal. Skipped in standard runs.

Grep-based scan of SKILL.md, agent .md, and doc files for self-marketing language patterns. Outputs replacement suggestions — no automatic edits.

Detection patterns:

Pattern	Examples	Replacement direction
Self-declarations of quality	"industry-leading", "the world's first", "core skill", "best"	Delete — no external evidence
Version / iteration labels	"v0.3", "22nd naming round", "26th iteration", "(added 2026-05-24)"	Remove (git history manages versioning)
Cushion language	"easily", "instantly", "seamlessly", "without burden", "fully automated"	Replace with behavior-based description
Owner self-reference loops	"validated by our team", "proven internally"	Delete or replace with external evidence
Marketing word stacking	3+ adjectives in one sentence	Reduce to functional description
Spec-only artifacts	SKILL.md or agent file missing Done When section	Add observable output criteria

Scan targets:

find {FH_ROOT}/plugins -name "SKILL.md" | sort
find {FH_ROOT}/.claude/agents -name "*.md" | sort
find {FH_ROOT}/docs -name "*.md" 2>/dev/null | sort

Detection commands:

# version / iteration labels
grep -n "v[0-9]\+\.[0-9]\|[0-9]\+th\|[0-9]\+th iteration\|prototype [0-9]\+" {file}
# cushion language
grep -n "fully\|instantly\|full coverage\|automatically\|conveniently\|easily\|without burden\|seamlessly" {file}
# self-declaration patterns
grep -n "core skill\|world's first\|best\|most\|top\|industry-leading" {file}

Output format (per file):

File: {path}
  L{N}: "{original text}"
  → Suggested: "{replacement}" (reason: {pattern type})
  → Or: remove (reason: {pattern type})

Lint findings feed into Step 7 report as a separate "Language Quality" section — not mixed into structural M/S/R tiers. Lint findings are advisory: HIGH (spec-only = missing Done When, treat as S-tier) / LOW (language patterns, R-tier).

---

Step 4. L3 — Drift Diagnosis

Check	Tier
Broken local file references in CLAUDE.md	M-tier
.claude/rules files unmodified 90+ days	R-tier
settings.json JSON syntax error	M-tier
Hooks in settings.json (PostToolUse/Stop) that don't fire in Agent View	S-tier or M-tier
Public-surface FH recommendation or default changed — no N-shot measurement evidence traceable in session records or PR body	S-tier
Pre-commit-adjacent gate reads the working tree (cat/glob of a tracked path) with no --staged/--cached/git show : on that path, when its verdict is about what's committed	S-tier

Hook divergence verdict: 0 hooks = Normal · 1+ hooks (session-end/Stop) = S-tier · 1+ hooks (PostToolUse file writes or external API) = M-tier (data loss risk in Agent View).

Index-vs-worktree gate lint (2026-06-21, gate-locality corollary — [[feedback_gate_locality_principle]]): a gate whose verdict is about what is being committed must read the staged index (git ls-files --cached / git show :path), not the working tree (cat/glob of a tracked file) — else it false-PASSes a commit whose staged content ≠ disk (origin: count_check.sh read the worktree while the pre-commit hook fired on the index; the sibling regression_guard already used --staged, so the lesson existed but was non-local). Mechanical scan — in the pre-commit hook + the scripts it invokes (+ scripts/*-check.sh): flag a cat/</glob read of a tracked path with no --staged/--cached/git show : on that path. Conditional (NOT universal): a gate whose verdict is about what runs/deploys (pre-push tests, build, an auto-fixer that rewrites the worktree) correctly reads the working tree — a line-level # worktree-intentional: comment suppresses the flag. FP surface (isolated-critic): display/log reads and untracked generated files are not violations → keep advisory (S-tier, never M).

Step 5. L4 — Connection Diagnosis (FH only)

• Tracks with no sync in 30+ days → R-tier
• CATALOG.md: 5+ open items in recent 5 sessions → S-tier
• Field project CLAUDE.md missing → S-tier
• Knowledge cross-ref lint: knowledge/**/*.md with no CATALOG.md entry → S-tier (index orphan — unfindable via CATALOG-first search); with no inbound reference from any CLAUDE.md / rules / SKILL.md / knowledge doc → R-tier (orphan page). Mechanical: grep -L filenames against CATALOG.md, then grep -rl for inbound refs.

Step 6. L5 — Pattern Analysis (FH only)

L5-A Skill Activity (grep-based on session records):

State	Criteria	Tier
ACTIVE	2+ times in 30 days	Normal
LOW_ACTIVE	1 time in 30 days	R-tier
INACTIVE_30D	0 times in 30 days	S-tier
INACTIVE_90D	0 times in 90 days	M-tier

L5-B Call Context Appropriateness: Keyword grep for known misuse patterns (hub-persona-auditor in code PR context · sim-conductor without onboarding · harness-doctor self-loop). Report as "suspected (false positive possible)" — no LLM call.

L5-C Effect Metrics:

Metric	OK condition	Tier if failing
E1 CLAUDE.md lines	Decrease or ±10	E1_WARN if +50 lines
E2 Complexity ratio	≤100 lines/skill	E2_WARN (≤200) / E2_FAIL (>200)
E3 CATALOG open consumption	≥50% in 30 days	—
E4 harvest signals	≥3 in 30 days	—
E5 SKILL.md change	Within 14 days	—
E6 Cold audit	Within 30 days	E6_WARN
E7 Evolution-loop observability	Asset edits have edit_manifest predictions	E7_WARN = S-tier

HHS (Harness Health Score): Each OK condition = +1 point (7 max). HHS ≥ 4 = Healthy · 2~3 = Caution · ≤1 = Critical.

Detail: See SKILL_detail.md §L5-Detail — bash scripts for L5-A, L5-B, L5-C/E metrics — read when running L5 pattern analysis.

---

Harness-Defect Taxonomy (frontier cross-check)

Defect class	FH detectable signals	Tier
Context Drift	Stale paths in CLAUDE.md (L3) · rules unmodified 90+ days (L3) · CLAUDE.md over threshold (L2)	S
Schema Misalignment	Plugin count drift · SKILL.md missing Done When (undocumented contract)	M
State Degradation	tracks/ no sync 30+ days (L4) · INACTIVE_90D skills (L5-A) · orphaned memory entries	M
Agentic Laziness (runtime)	Completion claims without per-item evidence — "all N done" with no enumerable list in session records / PR bodies · Done When lacking any mandatory-pass condition	S
Self-Preferential Bias (runtime)	judged-class check without a named adversarial pairing (gate-rejectable for new skills; scan existing for backfill) · a self-graded verdict cited as sole completion evidence	M
Goal Drift (runtime)	Long session with S/A-tier work but no pre-compaction completion log (fh_completed_* missing) · early-stated constraints absent from card/manifest at close	S
Comprehension Debt (runtime/operator)	Merged FH-asset change with no CATALOG entry · edit_manifest validation_status: pending backlog piling up unverified · session closed with work done but zero card delta	S
Evidence Gap (FH self-dev)	Public-surface FH recommendation or default changed with no N-shot measurement evidence traceable in session records or PR history (L3 check)	S

Signal in 2+ classes → escalate one tier. Rows 1–3 = structural (2026-06-02 frontier diagnosis). Rows 4–6 = runtime behavioral, agent-side — named from dynamic-workflows discourse (2026-06). Row 7 = runtime, operator-side — named from loop-engineering discourse (Osmani, 2026-06): loop output outpacing operator understanding. FH countermeasures already exist and are what the signals check for: golden probes + multi-persona coverage (laziness) · judged-pairing rule (bias) · pre-compaction completion log + card-last guard (drift) · CATALOG 3-line summaries + manifest predict-verify + card protocol (comprehension debt).

---

Step 7. M/S/R Prescription Report Output

## harness-doctor Diagnostic Results

### 🟥 M-tier (Immediate Action)
### 🟧 S-tier (Strongly Recommended)
### 🟩 R-tier (Recommended)

---
## ETCLOVG Layer Coverage (L1-E)
- Covered: [layers with an asset, e.g. E·T·C·L·V·G]
- Gaps (surfaced, never auto-tiered — each "(human-confirm)"): [e.g. "O Observability (human-confirm) — retrospective audit only, no runtime layer"] or "full coverage"

---
## L5 Pattern Analysis
- Activity (L5-A): [list]
- Context appropriateness (L5-B): [suspected misuse or "no issues"]
- Effect metrics (L5-C): E1=[result] / E3=[result] / E5=[result]

---
## Language Quality (`--lint` mode only)
- HIGH (spec-only — missing Done When): [list or "none"]
- LOW (language patterns): [file: L{N}: "{text}" → {suggestion}]

Diagnostic scope: L1 (+L1-E ETCLOVG coverage) ~L3 [· L4 · L5 (FH only)] [· --lint]

M-tier 0 → output "Structure healthy. Maintaining simplification trend."

M-tier Immediate Human Gate: If 1+ M-tier found → pause, surface options: (a) AI proceeds to Step 8 / (b) human review first / (c) abort. Do not auto-apply prescriptions that could close a self-referential loop.

Step 8. harvest-loop Integration (when tracks/_audit/ exists)

When 1+ M-tier found → propose adding ## Harness Structure Check (harness-doctor) section to latest weekly_audit file.

Step 9. Eval-First Quantitative Gate (v0.x → v1 promotion only)

Thresholds (measured over 5 sim-conductor runs): Tool Selection Accuracy > 0.90 · Multi-Step Coherence > 0.85 · Clarification Rate < 0.30.

Step 10. Regression Guard (when SKILL.md / rules / CLAUDE.md modified)

Verifies that prescription application didn't strip operational content. Run after prescription applied, at pre-merge gate, or when harvest-loop Step 4 detects file changes.

Check	Tier
F1 Frontmatter integrity	M
F2 Critical section preservation (Execution Steps · Done When · Triggers)	M
F3 Code block count not reduced by 4+	S
F4 Operational keyword preservation (M-tier/S-tier/Wave/Step/Done When)	M if ≥50% drop · S if 20~49%
F5 Cross-reference paths resolve	M
F6 Line reduction ≥30%	S
F7 Bash block syntax (bash -n parse)	M if net increase in bad blocks

Verdict: ✅ PASS (0M 0S) · ⚠️ REVIEW (0M 1+S) · ❌ BLOCK (1+M) · ⏭️ SKIP (검사 대상 0 — PASS 가 아니다).

Implementation: bash templates/regression_guard.sh (compare vs main) or bash templates/regression_guard.sh BASE HEAD. Verdict 는 종료코드가 아니라 typed 채널로 읽어라 — exit 0 은 pass 와 skip 둘 다다(2026-07-23): REGRESSION_GUARD_RESULT_FILE=/tmp/rg.$$ bash templates/regression_guard.sh … 후 파일의 result=pass|review|block|skip 를 판정에 쓴다. skip = 미검사 — PASS 로 보고하지 말고 "Axis 1 해당 없음(대상 파일 0)" 으로 보고한다.

Detail: See SKILL_detail.md §Step-1-3 — bash scripts for Steps 16 (L1L4 diagnostics) — read when running the diagnostic commands.

Step 11. PR Change Consistency Check (triggered on "PR" / "push" / branch with FH changes)

Detect changed files vs main → category-based consistency checks:

Category	What's checked
SKILL.md changes	Plugin description count drift · README skill table · CATALOG entry
Agent file changes	README agent count · agent_cards.json count sync
knowledge/shared/ changes	CATALOG coverage
README.md changed	Stale org/version references
AGENTS.md / CLAUDE.md changed	Agent count cross-reference sanity

Verdict: ✅ CONSISTENT · 🟧 INCONSISTENT (fix before push) · 🟩 REVIEW (intent check).

Auto-propose (non-blocking) when "PR", "push", "merge" detected in session.

Detail: See SKILL_detail.md §Step11 — bash scripts for each consistency check category — read when running PR change verification.

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Done When

Stage	Completion
Step 7 M/S/R prescription report output	✅ Diagnosis complete
Step 2-E ETCLOVG coverage line in report (covered layers + gaps, or "full coverage")	✅ Layer-coverage lens applied
M-tier 0 + "Structure healthy" output	✅ Diagnosis complete (no prescription needed)
Step 8 weekly_audit section proposed	✅ Integration proposal complete
Step 9 Eval-First verdict output (when requested)	✅ Promotion verdict complete
Step 10 Regression Guard verdict (PASS/REVIEW/BLOCK)	✅ Post-fix verification complete
Step 11 PR consistency check verdict	✅ PR pre-push verification complete

This skill Done When = "prescription report output complete". Actual resolution of M/S/R items belongs to user or follow-up work.

Check classes (harness_6axis_framework.md §Axis 5): report-output completions above = mandatory-pass (report exists or not). M/S/R tier assignments = judged — paired with verify-bidirectional when the user challenges a tier.

Verdict: PASS (M-tier 0, "Structure healthy") | CONDITIONAL_PASS (S/R remain, no M) | FAIL (1+ M-tier found) | ESCALATE (structural ambiguity before prescription can be issued)

Three-Doctor Loop chain (auto-propose after prescription report):

• M-tier + context/token waste → propose /context-doctor
• M-tier + user-facing behavior changes → propose /sim-conductor Area A
• SKILL.md S-tier (> 300 lines, no SKILL_detail.md) → auto-propose /salience-splitter: "I see [skill] SKILL.md is [N] lines with no SKILL_detail.md. Want me to run /salience-splitter?"
• Both → propose full Three-Doctor Loop: context-doctor → sim-conductor Area A

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Trigger Phrases

• /harness-doctor · "harness diagnosis" · "harness structure check" · "CLAUDE.md audit"
• /harness-doctor --lint · "check FH files for marketing language" · "description diet" · "remove marketing language" (→ Step 3-L)
• "my Claude settings seem off" · "something that used to work doesn't anymore" · "skill isn't triggering"
• "PR 올려줘" · "PR check" · "변경사항 영향 범위" (→ Step 11)

No auto-firing — only executes when user explicitly invokes. Step 11 exception: propose as one-liner when "PR"/"push"/"merge" detected.

Failure Fallback

On Claude API / MCP failure → refer to references/fallback-guide.md.

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Three-Doctor Loop Integration

harness-doctor = current structure diagnostician. context-doctor = context collapse. sim-conductor = future behavior prediction. Together: diagnose → prescribe → re-diagnose closed loop.