iblatlas

Load the Allen/Knox regularized-regression mesoscale mouse connectivity matrix and the Harris et al. cortico-thalamic hierarchy scores using iblatlas. Use when the user asks to load mesoscale connectivity, the mouse connectome, connection strength/density, or cortical/thalamic hierarchy scores.

Load the Allen Gene Expression Atlas (AGEA) volumes using iblatlas. Use when the user asks to load AGEA, gene expression volumes, or the gene expression atlas.

Load the MERFISH single-cell atlas (parquet dataframes) and the MERFISH cell-type density volumes using iblatlas, including how to denoise the volumes. Use when the user asks to load MERFISH, single-cell atlas data, cell-type data, MERFISH volumes, or how to denoise/preprocess them.