bipartite

Check remote server CPU, memory, and GPU availability via SSH

Cold-start into a worktree/clone from a fresh conversation — read the PR, issue, and any status files, figure out where things stand, then STOP and ask the user what to do next. Use for a fresh conversation dropped into a bip-spawn or bip-epic-spawn worktree/clone that already has history (a PR, an in-progress phase, or a stalled worker).

Quick poll of tracked EPICs and code repos for new manuscript-relevant results

Persist manuscript session state before context reset

Cold-start for a manuscript session — the paper is the source of truth and shared context; discuss results, orchestrate research through issues/PRs, and update the paper as threads complete

Spawn a Claude session in a clone for an EPIC issue

Worker self-spawns a follow-up issue and hands off to a new slot

Quick poll of GitHub activity and clone status since last check

EPIC cold-start dashboard — full scan of clones, GitHub, and EPIC issues

Land a PR branch — squash merge, clean up local and remote branches, return to main.

Open a tmux window with a Claude Code session for a GitHub issue or PR.

Unified guidance for using the bipartite reference library CLI. Use when searching for papers, managing the library, or exploring literature via S2/ASTA.

Quiesce the whole tmux host before a PLANNED reboot — walk every session, resolve each Claude window's exact session id, optionally checkpoint workers, and write a manifest so bip-epic-recover can rebuild the workspace deterministically. Use when you know a reboot is coming and want a clean, lossless restart.

Recover bip-epic Claude sessions after a host reboot — replay a planned-reboot manifest if one exists, else find the killed sessions by scanning jsonl, label them, and resume each into a tmux window. Use when a box running a bip-epic fleet rebooted and the tmux sessions are gone.

Draft the next GitHub issue — from a PR follow-up, a focus file, or the current conversation — review it with /bip-issue-check, and submit

Pre-share / pre-submission polish sweep of a TeX manuscript. Fans out parallel scans (writing review, citations, orphan floats, terminology, numbers, URLs, tool names, editorial markers), a literature-gap check via bip asta, and submission hygiene. Reports findings as an interactive punch list — does not produce a report file or auto-edit the paper.

Audit a manuscript against its implementation(s) — read the paper and code in parallel, find places where formulas, algorithms, dimensions, or complexity claims diverge from what the code actually does. Use the skeptic agent to confirm surprising findings before reporting.

Run comprehensive pre-merge quality checklist for current branch's PR

Manage GitHub project boards. Add, move, and remove issues; boards auto-resolve from repo→channel mappings in sources.yml.

Check in on recent GitHub activity across tracked repos. Filters to items needing your action (ball-in-court).

Fact-check a PR review or comment against the actual code, docs, and tests

Sweep a repo for the decay modes Armin Ronacher calls out in agent-written codebases — duplicate symbols, monster files, zombie code, scaffolding duplication, test asymmetries — and diff against a previous run. Not a PR reviewer; a whole-repo weather check.

Generate Slack activity digests from GitHub activity across a channel's repos. Preview by default; --post to send.

Review an EPIC issue markdown file for strategic clarity, cost soundness, and scope discipline

Persist orchestrator state before context reset

Review an issue markdown file for completeness, then submit via /bip-issue-file

Create or update GitHub issue from markdown file using --body-file

Re-evaluate an existing GitHub issue against current repo state, fix stale content, then run /bip-issue-check

Read a GitHub issue and implement the work described in it

Reflect on what just happened and propose a concrete improvement to skills, CLAUDE.md, docs, or workflow.

Add knowledge graph edges from TeX paper citations. Use when connecting papers cited in manuscripts to the bip knowledge graph.

Extract paper references and concepts from a LaTeX repository for the bipartite knowledge graph.

Import Paperpile JSON export into bip library, rebuild database, and clean up.

Generate and edit marimo reactive notebooks correctly. Auto-triggers when working with marimo .py notebook files.

Generate thematic, prose-style narrative digests from GitHub activity

Enter plan mode with full context preserved — gathers branch/PR/file context before the planning agent starts, so nothing is lost when plan mode clears conversation history.

Quick PR readiness check — clean worktree, good description, squashed body. Run before /bip-pr-review.

Open a file in a tmux popup window using less