deepscientist-paper-reliability-verification

name	deepscientist-paper-reliability-verification
description	Verify paper reliability through the bundled DeepScientist verifier workflow before using papers as evidence.
version	1.1.2
author	Hermes Agent
license	MIT
metadata	{"hermes":{"tags":["research","papers","reliability","citations","openreview","acl-anthology","dblp","crossref","venue-ranking","cas-partition","ccf","core"],"category":"research","related_skills":["research-paper-writing","csv-taxonomy-consolidation","arxiv"]}}
skill_role	companion

Codex adapter note: this support skill is bundled for DeepScientist Codex Native. Use scripts/dsctl.py call <ds_tool_name> --json ... --format json for DeepScientist state, load at most one support skill alongside the active stage, and keep transport="codex-native-cli" / mcp=false. Do not use MCP transport or the external ds command. Runtime state lives under <project>/DeepScientist/. Use ds_paper_reliability_verify as the primary DeepScientist tool wrapper; it stores reliability cards under quest-local reference/reliability_cards/ and keeps accepted_publication evidence auditable.

Paper Reliability Verification

Overview

Use this skill when a literature review, research plan, survey, or paper-writing task needs to decide whether a candidate paper is strong evidence, supporting evidence, weak/contextual evidence, or needs human review.

The core pattern is: do not treat a paper as reliable merely because it was found or downloaded. Verify citation signals, publication status, accepted venue/journal, and venue authority separately, then combine them conservatively.

Recent local verifier extensions added OpenReview as a first-class accepted-venue route for known OpenReview-hosted venues (for example ICLR), while preserving the same accepted_publication output contract as ACL Anthology and DBLP.

For this user's current workspace, the working draft verifier lives at:

resources/skills/paper-reliability-verifier

The local ranking snapshots used for accepted conference/journal authority checks live at:

resources/skills/paper-reliability-verifier/paper_ranking

Expected ranking files:

conference_ranking.csv
journal_ranking.csv

When to Use

Use this skill when:

• evaluating papers found during literature review or DeepScientist research;
• checking whether a paper's accepted conference/journal is authoritative;
• comparing venue rank signals such as CCF, CORE, 中科院期刊分区, WOS index, or 中科院 Top;
• separating preprint-only evidence from conference/journal accepted publications;
• generating an evidence card before citing a paper as key support;
• extending the local paper_reliability_verifier skill/tool with another source of acceptance evidence.

Do not use this skill for:

• merely downloading PDFs; use the DeepScientist paper-fetch workflow for retrieval;
• llm-wiki clipping/archive tasks;
• claiming Google Scholar citation counts from automation. Google Scholar is manual-only.

First Principles

Separate these questions:

1. Identity: Is this the same paper? Match DOI, title, authors, and year.
2. Publication status: Is it retracted, corrected, preprint-only, workshop-only, short/demo/poster, or main-track/full?
3. Acceptance venue: Has it been indexed or confirmed as accepted by a specific conference or journal?
4. Venue authority: What do local CCF/CORE/JCR ranking snapshots say about that confirmed venue?
5. Impact proxy: What do OpenAlex, Semantic Scholar, and Crossref citation counts say? Keep counts source-specific.
6. Decision tier: Synthesize into a cautious tier with warnings, never a single blind score.

Local Ranking Lookup

For confirmed conferences, look up:

resources/skills/paper-reliability-verifier/paper_ranking/conference_ranking.csv

Key fields:

• 会议名称
• 简称
• CCF等级
• CORE等级
• CCF领域
• 数据来源
• 匹配依据
• CORE名称别名

For confirmed journals, look up:

resources/skills/paper-reliability-verifier/paper_ranking/journal_ranking.csv

Key fields:

• 期刊名称
• 简称
• CCF等级
• CCF领域
• 中科院大类
• 中科院大类分区
• 中科院 Top
• WOS索引
• 中科院小类分区
• 特殊标注
• 数据来源

Keep CCF, CORE, 中科院分区, and Clarivate JCR fields separate. Do not collapse them into one universal rank. For this user's verifier, journal_ranking.csv contains both 中科院分区 (中科院大类分区/中科院小类分区, output journal.cas_quartile) and merged JCR 2024 fields (JCR分区2024/JCR影响因子2024, output journal.jcr_quartile and journal.impact_factor). Older local snapshots may still contain legacy JCR* column names that actually meant 中科院; treat those only as backward-compatible aliases.

OpenReview Accepted-Venue Detection

OpenReview is the first specialized automatic route when the target paper belongs to a known OpenReview-hosted venue such as ICLR, TMLR, COLM, or another venue with a supplied venue ID. Use it before ACL Anthology and DBLP only when a venue ID is known from --openreview-venue-id or a trusted environment/config mapping; do not perform ambiguous global OpenReview guessing.

Detailed session notes, implementation contract, and verified commands are in:

references/openreview-accepted-venue.md

For tasks that ask to discover/download all public papers from an OpenReview-hosted venue matching a topic (rather than verify one paper's authority), use the companion operational reference:

references/openreview-public-proceedings-download.md

That reference covers probing whether ICLR/ICML-style venue submissions are public, filtering accepted notes by title/abstract/keywords, downloading PDFs from stored /pdf/<hash>.pdf values with pdf?id= fallback, writing a manifest, and verifying every manifest PDF with ls -lh, %PDF- header, size, and SHA256.

Implementation pattern:

1. Preserve explicit user confirmation priority: --accepted-venue stays stronger than all automated routes.
2. If a trusted OpenReview venue ID is available, query OpenReview before ACL Anthology and DBLP.
3. For API 2 venues, prefer client.get_all_notes(content={"venueid": venue_id}, details="replies") and match title/year conservatively.
4. For older API 1 venues, search blind submissions and inspect direct Decision replies.
5. Separate acceptance from presentation: accepted=true confirms venue acceptance; presentation_type stores oral, spotlight, poster, or accepted_unknown_presentation_type.
6. Return openreview_confirmed only for high-confidence title/venue matches; return a warning or ambiguous status for no-close-match, not-found, rejected, or low-confidence cases.

In the local verifier, this logic is documented in:

resources/skills/paper-reliability-verifier/subskills/openreview-accepted-venue/SKILL.md

ACL Anthology Accepted-Venue Detection

ACL Anthology is the specialized automatic route for NLP / computational-linguistics accepted-venue detection when the paper may be in ACL, EMNLP, NAACL, EACL, AACL, COLING, CoNLL, TACL, CL, Findings, or ACL Anthology workshops. Use it after OpenReview when a known OpenReview venue ID has not confirmed the paper, and before DBLP when the user has not supplied a confirmed accepted venue.

Detailed session notes and verified commands are in:

references/acl-anthology-accepted-venue.md

Implementation pattern:

1. Use acl_anthology.Anthology.from_repo(verbose=False) to locate/update the official ACL metadata checkout and obtain anthology.datadir.
2. For broad title/DOI search, scan data/xml/*.xml and venue YAML under data/yaml/venues/*.yaml instead of forcing global package indices.
3. Prefer exact DOI match; otherwise require high normalized title similarity, around 0.90, plus year match when year is known.
4. Return accepted_publication.status = acl_anthology_confirmed only for high-confidence hits.
5. Map ACL/EMNLP/NAACL/EACL/AACL/COLING/CoNLL-style venues to conference; map TACL/CL to journal.
6. Preserve volume-title distinctions: ACL Anthology Findings is a confirmed ACL-family publication track and may be strong evidence by inheriting the parent ACL/EMNLP/NAACL/EACL/AACL/COLING/CoNLL venue rank; workshops, short/demo/tutorial/shared-task/poster/extended-abstract records remain non-main-track caveats.

Pitfall: the installed acl-anthology package can emit SchemaMismatchWarning when its bundled schema lags behind the latest downloaded metadata. Avoid building global venue/event/person indices unless needed; XML scanning from the package-managed data dir is more robust for verifier lookups.

In the local verifier, this logic is documented in:

resources/skills/paper-reliability-verifier/subskills/acl-anthology-accepted-venue/SKILL.md

Crossref Works Accepted-Publication Fallback

Crossref is used both for DOI metadata/citation/update signals and as a conservative accepted-publication fallback after OpenReview, ACL Anthology, and DBLP do not confirm a venue.

Detailed session notes, API quirks, implementation contract, and regression-test checklist are in:

references/crossref-accepted-publication.md

Docs:

https://api.crossref.org/swagger-ui/index.html
https://api.crossref.org/swagger-docs

Endpoint patterns:

GET https://api.crossref.org/v1/works/{doi}
GET https://api.crossref.org/v1/works?query.title=...&filter=from-pub-date:YYYY-01-01,until-pub-date:YYYY-12-31&select=...

Rules:

1. Prefer DOI match from /works/{doi}.
2. For title-only fallback, require high title similarity and year match when year is known.
3. Treat journal-article with container-title as confirmed journal publication.
4. Treat proceedings-article or records with event.name as conference/proceedings evidence.
5. Treat posted-content and arXiv/bioRxiv/medRxiv/preprint containers as preprint-only.
6. Preserve update-to, relation, ISSN/ISBN, publisher, URL, and is-referenced-by-count under accepted_publication.crossref.
7. Use CROSSREF_MAILTO for query mailto and User-Agent mailto when available.

Status values:

crossref_confirmed
crossref_preprint_or_unclassified
crossref_not_found_or_ambiguous

Use --no-crossref to disable this fallback.

DBLP Accepted-Venue Detection

DBLP is the broad CS automatic route for accepted-venue detection after ACL Anthology does not confirm an NLP/CL paper.

DBLP docs:

https://dblp.uni-trier.de/faq/How+to+use+the+dblp+search+API.html

Endpoint:

https://dblp.org/search/publ/api

Canonical query:

curl -s 'https://dblp.org/search/publ/api?q=<title+authors+year>&format=json&h=10&c=0'

Use conservative hit selection:

1. Prefer exact DOI match when DBLP returns DOI.
2. Otherwise require high normalized title similarity, default around 0.88 or higher.
3. If year is known, require year match for title-based acceptance.
4. If low-similarity or ambiguous, return dblp_not_found_or_ambiguous and do not fabricate a venue.

Map DBLP records:

• key starts with conf/ or type contains Conference, Workshop, or Proceedings -> conference-like venue.
• key starts with journals/ or type contains Journal -> journal-like venue.
• journals/corr/... or venue CoRR -> preprint only; do not treat as conference/journal acceptance.

In the local verifier, this logic is documented in:

resources/skills/paper-reliability-verifier/subskills/dblp-accepted-venue/SKILL.md

Local Verifier Usage

Default OpenReview/ACL-Anthology/DBLP-enabled verification:

cd resources/skills/paper-reliability-verifier
python3 scripts/verifier.py \
  --title 'Graph Neural Networks for Learning Equivariant Representations of Neural Networks' \
  --year 2024 \
  --openreview-venue-id ICLR.cc/2024/Conference

Expected behavior for the OpenReview example:

• OpenReview is queried with the supplied venue ID before ACL Anthology and DBLP.
• A confirmed accepted ICLR paper fills accepted_publication.status = openreview_confirmed.
• ICLR presentation labels such as oral/spotlight/poster are captured in accepted_publication.openreview.presentation_type, not collapsed into the main venue type.
• local conference ranking resolves ICLR to its local CCF/CORE fields when available.

Default ACL/DBLP fallback verification:

cd resources/skills/paper-reliability-verifier
python3 scripts/verifier.py \
  --title 'Deep Residual Learning for Image Recognition' \
  --year 2016

Expected behavior for the example:

• For ACL/EMNLP/NAACL-style NLP papers, ACL Anthology is tried first and can fill accepted_publication.status = acl_anthology_confirmed with Anthology ID, URL/PDF URL, venue acronym/name, and volume title.
• If ACL Anthology does not confirm, DBLP searches broader CS records.
• DBLP finds conf/cvpr/HeZRS16.
• accepted_publication.status is dblp_confirmed.
• venue_name is CVPR.
• local conference ranking resolves CVPR to CCF A / CORE A*.

Disable OpenReview when testing fallback behavior:

python3 scripts/verifier.py --title 'paper title' --no-openreview

Disable DBLP when testing fallback behavior:

python3 scripts/verifier.py --title 'paper title' --no-dblp

Explicitly provide confirmed venue when an upstream/manual route already verified acceptance:

python3 scripts/verifier.py \
  --title 'paper title' \
  --accepted-venue 'AAAI Conference on Artificial Intelligence' \
  --accepted-type conference \
  --accepted-acronym AAAI

For confirmed journal:

python3 scripts/verifier.py \
  --doi '10.xxxx/yyyy' \
  --accepted-venue 'ACM Computing Surveys' \
  --accepted-type journal

Output Contract

The verifier should preserve an accepted_publication object so future routes can plug in without changing rank lookup:

{
  "status": "user_provided_confirmed | dblp_confirmed | dblp_preprint_or_unclassified | dblp_not_found_or_ambiguous | metadata_inferred_unconfirmed",
  "venue_name": "CVPR",
  "venue_type": "conference | journal | preprint | auto",
  "acronym": "CVPR",
  "evidence_source": "dblp publication search: title_year_match",
  "interface_version": "accepted-publication-v1"
}

Downstream ranking fields then appear under venue or journal, not inside citation fields.

Verification Checklist

Before trusting a reliability result:

• The paper identity match is clear: DOI match or high title/year match.
• DBLP CoRR records were treated as preprints, not accepted venues.
• Accepted conference/journal rank was read from the local paper_ranking CSVs.
• CCF, CORE, and 中科院分区 ranks remain separate fields, with journal output using cas_quartile rather than jcr_quartile.
• Citation counts are source-specific and checked at a date.
• Retraction/update status was checked when DOI metadata is available.
• Workshop/short/demo/poster caveats are not suppressed; ACL Anthology Findings is handled separately as a confirmed ACL-family track that may be strong evidence after parent-venue rank lookup.
• Ambiguous venue detection results produce warnings or needs_human_review.
• Downstream filters use an explicit accepted-status allowlist, not substring matching. In particular, metadata_inferred_unconfirmed contains the text confirmed but is not a confirmed accepted publication.

Common Pitfalls

1. Using DBLP absence as proof of no acceptance. DBLP is strong for CS but incomplete. Absence means unknown, not rejected.
2. Treating CoRR as journal acceptance. DBLP stores arXiv/CoRR under journals/corr; this is preprint evidence only.
3. Ranking a guessed venue. Only rank a confirmed or high-confidence accepted venue.
4. Mixing venue authority with paper correctness. CCF A / 中科院1区 supports authority but does not prove claims are true.
5. Overusing fuzzy matches. Keep fuzzy/low-confidence matches as human-review candidates unless similarity is high and year/DOI supports the match.
6. Substring-testing verifier statuses. Never use logic like 'confirmed' in status: it misclassifies metadata_inferred_unconfirmed as confirmed. Use an explicit accepted-status whitelist such as user_provided_confirmed, openreview_confirmed, acl_anthology_confirmed, dblp_confirmed, and crossref_confirmed; treat *_unconfirmed, *_not_found_or_ambiguous, and *_preprint_or_unclassified as non-confirmed unless another trusted route/user instruction retains the paper.
7. ArXiv/title-only citation gaps. If a verifier card for a known arXiv paper has empty OpenAlex/Semantic Scholar/Crossref citation counts, do not immediately downgrade the paper. Supplement with arXiv DOI 10.48550/arXiv.<id>, Semantic Scholar ArXiv:<id>, OpenAlex DOI/title search, DBLP CoRR metadata, or explicit accepted-venue input when externally verified. This is especially important for classic high-impact papers such as Universal Transformers, ACT, DEQ, and LoRA.
8. ArXiv-only preprint status ambiguity. When an input has an arXiv URL but no confirmed accepted venue/journal, treat it as preprint-unconfirmed even if a local card reports is_preprint_only=false; add a caveat until an accepted venue route confirms publication.
9. ACL Anthology schema warnings during batches. SchemaMismatchWarning: Data directory contains a different schema.rnc as this library can appear repeatedly in batch verification. It is noisy but not necessarily fatal; do not stop solely for this warning unless lookups fail. Prefer warning suppression/log capture in scripts and update ACL Anthology metadata/library in maintenance passes.
10. Misclassifying ACL Anthology Findings as weak/non-main-track by default. For this user's verifier policy, ACL Anthology Findings is a confirmed ACL-family publication track. If the hit is independently confirmed by ACL Anthology and the parent ACL-family venue rank is top-tier, it may be strong_evidence. Keep workshop, short, demo, tutorial, shared-task, poster, companion, and extended-abstract caveats separate; do not let the word Findings alone trigger non-main-track demotion.