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Run the testrun.wdl for a WILDS module or pipeline using sprocket or miniwdl
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Create a new WILDS WDL module for a bioinformatics tool following project conventions
Create a new WILDS WDL pipeline that combines existing modules into a workflow
Add a new test data download task to the ww-testdata module for use in module/pipeline testruns
Run WDL linting on a WILDS module or pipeline and fix any issues found
Draft a pull request description using the project's PR template
Baseado na classificação ocupacional SOC
| name | run-tests |
| description | Run the testrun.wdl for a WILDS module or pipeline using sprocket or miniwdl |
| argument-hint | <ww-name> [executor] |
| allowed-tools | Bash(make *), Read, Glob, Grep |
Execute the testrun.wdl for $0 and report results.
Find testrun.wdl in either:
modules/$0/testrun.wdlpipelines/$0/testrun.wdlIf a second argument ($1) is provided, use that executor. Otherwise default to sprocket.
Sprocket:
make run_sprocket NAME=$0
miniWDL:
make run_miniwdl NAME=$0