migrate-overleaf

name	migrate-overleaf
description	Sync the overleaf/ folder with the current content of paper/. Copies all LaTeX source, figures, tables, appendix, and bibliography. Puts the model section as overleaf/model.tex (top-level) for easy coauthor access. Run whenever paper/ changes and you want to push to Overleaf.
allowed-tools	["Bash","Read","Write","Glob"]

Migrate paper/ → overleaf/

Sync the overleaf/ folder with the current state of paper/. This is a one-way sync: paper/ is the source of truth; overleaf/ is the Overleaf-ready export.

Steps

1. Recreate directory structure

mkdir -p overleaf/sections overleaf/figures overleaf/tables overleaf/appendix

2. Copy section files (all except 03_model)

cp paper/sections/01_introduction.tex  overleaf/sections/
cp paper/sections/02_data.tex          overleaf/sections/
cp paper/sections/04_empirics.tex      overleaf/sections/
cp paper/sections/05_results.tex       overleaf/sections/
cp paper/sections/06_conclusion.tex    overleaf/sections/

3. Copy model section to top-level (coauthor-visible)

cp paper/sections/03_model.tex overleaf/model.tex

The model lives at overleaf/model.tex (not buried in sections/) so coauthors can find it immediately in Overleaf's file tree.

4. Copy figures, tables, appendix, bibliography

cp paper/figures/*.pdf    overleaf/figures/ 2>/dev/null || true
cp paper/figures/*.png    overleaf/figures/ 2>/dev/null || true
cp paper/tables/*.tex     overleaf/tables/
cp paper/appendix/*.tex   overleaf/appendix/
cp paper/references.bib    overleaf/

5. Write overleaf/main.tex

Write overleaf/main.tex as an exact copy of paper/main.tex with ONE change:

• Replace \input{sections/03_model} with \input{model}

Read paper/main.tex first, then write overleaf/main.tex with that substitution.

6. Verify

Run a quick sanity check:

diff <(grep "\\\\input" paper/main.tex) <(grep "\\\\input" overleaf/main.tex)

Expected diff: only the model line differs (sections/03_model → model).

Count files:

echo "Sections: $(ls overleaf/sections/ | wc -l)"
echo "Figures:  $(ls overleaf/figures/  | wc -l)"
echo "Tables:   $(ls overleaf/tables/   | wc -l)"
echo "Appendix: $(ls overleaf/appendix/ | wc -l)"

7. Report

Print a summary:

overleaf/ synced from paper/
  Sections:   N files (+ model.tex at top level)
  Figures:    N files
  Tables:     N files
  Appendix:   N files
  Bib:        references.bib
  Model:      overleaf/model.tex  ← coauthors edit this

Notes

• overleaf/ is committed to git — coauthors pull it and upload to Overleaf
• paper/ is always the local source of truth; never edit overleaf/ files locally
• If a new section is added to paper/sections/, add a copy step here
• Figures must be PDF or PNG; Overleaf supports both
• The endfloat package is included — coauthors may need to install it in Overleaf (it is available in Overleaf's TeX Live distribution by default)