chezmoi-troubleshooting

name	chezmoi-troubleshooting
description	This skill should be used when the user encounters chezmoi failures, state issues, or configuration problems, such as when chezmoi doctor shows errors, scripts don't run as expected, chezmoi verify fails, chezmoi diff shows unexpected changes, state needs resetting, or merge conflicts occur in chezmoi source.

Chezmoi Troubleshooting

Systematic diagnostic workflows for chezmoi failures, state corruption, drift, and configuration problems.

Safety Constraints

SAFE operations only — never modify the system without user approval:

• chezmoi doctor — Full diagnostic
• chezmoi state dump — View script execution state
• chezmoi diff — Preview what would change
• chezmoi verify — Check files match source
• chezmoi execute-template — Preview template output
• chezmoi data — View template variables

FORBIDDEN without explicit approval: chezmoi apply, chezmoi update

1. Doctor Interpretation

Run chezmoi doctor and interpret the output:

Check	Expected	Failure Meaning	Fix
version	latest	Outdated chezmoi	brew upgrade chezmoi
config-file	found path	Config missing	chezmoi init or create manually
source-dir	git working tree (clean)	Source dirty or not git	chezmoi cd && git status
git-command	found path	Git not in PATH	Install git via mise/brew
edit-command	found path	Editor not configured	Set $EDITOR or configure in chezmoi.toml
1password	found path (optional)	op CLI missing	Only needed if using 1Password templates
age	found path (optional)	age not installed	Only needed if using age encryption
gpg	found path (optional)	gpg not found	Only needed if using GPG encryption

Filter for problems only:

chezmoi doctor | grep -v "^ok"

Color codes: ok = green (pass), warning = yellow (optional), error = red (must fix)

2. State Management

Chezmoi tracks script execution in two state buckets:

Bucket	Controls	When to Reset
scriptState	run_once_* scripts	Script was fixed after failed first run
entryState	run_onchange_* scripts	Script content hash mismatch

View current state:

chezmoi state dump

Reset run_once state (scripts will re-run on next apply):

chezmoi state delete-bucket --bucket=scriptState

Reset run_onchange state (both run_once and run_onchange are in scriptState):

chezmoi state delete-bucket --bucket=scriptState

Note: entryState tracks managed FILE state, not scripts. Deleting entryState would force a full re-apply of all managed files — use with extreme caution.

Common State Issues

run_once script doesn't run:

1. Check if already executed: chezmoi state dump | grep script_name
2. If state exists but script was fixed: reset scriptState bucket
3. If template condition blocks it: chezmoi execute-template < script.sh.tmpl

run_onchange runs every time:

1. Check for non-deterministic template output (timestamps, random values)
2. Verify data inputs are stable: chezmoi data
3. Reset entryState and re-apply

3. Diff Debugging

Interpret diff output:

chezmoi diff                          # All changes
chezmoi diff ~/.zshrc                 # Single file
chezmoi diff --exclude=scripts        # Skip scripts
chezmoi diff --include=files          # Files only

Unexpected changes — common causes:

Symptom	Cause	Debug Command
Template renders wrong	Syntax error	chezmoi execute-template < file.tmpl
Wrong variable value	Data mismatch	chezmoi data | grep variable_name
File appears modified	Local manual edit (drift)	chezmoi verify to confirm
Permission changes	Mode mismatch	Check source file prefix (executable_, private_)

Debug template expansion:

# Preview what a template would render to
chezmoi execute-template < "$(chezmoi source-path)/dot_zshrc.tmpl"

# Compare with deployed file
diff <(chezmoi execute-template < "$(chezmoi source-path)/dot_zshrc.tmpl") ~/.zshrc

4. Merge Conflict Resolution

chezmoi cd                            # Enter source directory
git status                            # See conflicted files
git diff                              # Review conflicts
# Manually edit conflicted files
git add <resolved-files>
git commit -m "Resolve merge conflict"
# Then: chezmoi diff to verify, chezmoi apply to deploy

5. Version Compatibility

Enforce minimum version with .chezmoiversion:

2.40.0

Place in source root. Chezmoi will refuse to operate if version is too old.

Diagnostic Flowchart

1. Start: chezmoi doctor — any errors? Fix those first
2. Then: chezmoi verify — any drift? Review with chezmoi diff
3. Then: chezmoi state dump — any stuck scripts? Reset relevant bucket
4. Then: chezmoi execute-template — template rendering correctly?
5. Still broken? Check chezmoi data for variable issues

Related Skills

• chezmoi-config — Template syntax and configuration reference
• chezmoi-workflows — Daily operations (prerequisite understanding)
• chezmoi-migration — Setup issues on new machines
• chezmoi-advanced-config — Encryption, git automation issues