SciForge

Submit protein folding tasks to the AlphaFold3 C550 inference platform. Use when the user needs to run AlphaFold3 predictions with pre-prepared JSON input files on the AI4S Kubernetes cluster.

Draft, confirm, and synchronize research status, evidence, blockers, and review-ready GitHub summaries using the Research Memory skill, GitHub conventions, and file templates.

Parse PDFs, Office files, images, and HTML into Markdown/structured outputs with MinerU. Use when SciForge or Codex needs document parsing/OCR for scientific papers, supplementary files, PDFs, scanned documents, tables, formulas, or URL/local-file parsing through MinerU standard or Agent lightweight APIs.