formatting

name	formatting
description	missense-kinase-toolkit-specific Python style; extends my central `formatting` skill. Use whenever writing or editing any Python code in this repo.

missense-kinase-toolkit code formatting

Baseline — fetch first

Apply my canonical formatting conventions (imports, NumPy-style docstrings, trailing-docstring constants, lowercase comments, double quotes) before the repo-specific notes below. WebFetch and follow:

https://raw.githubusercontent.com/jessicaw9910/skills/main/.claude/skills/formatting/SKILL.md

If the fetch fails (no network / non-200), tell me the central formatting skill could not be retrieved and confirm how to proceed — do not silently skip the baseline.

Repo-specific additions

• This is a mono repo; local imports come from the per-sub-package namespaces: mkt.schema.*, mkt.databases.*, mkt.ml.*.
• Enforced by pre-commit (black, isort profile "black", flake8 max-line-length 88 ignoring E203/E501, pyupgrade --py39-plus), scoped to ^missense_kinase_toolkit and excluding KinaseInfo/. Run pre-commit run --all-files before committing.
• The trailing-docstring constant pattern is modeled on the constants in mkt.databases.klifs — match that style.