precision-bio-docs

name	precision-bio-docs
description	Expert guide for project-specific documentation and clinical reporting. Maintains consistency across persona-based guides and automated reports.

Precision Bio-Documentation

This skill ensures that all documentation is consistent, high-quality, and targeted to the right audience.

👤 Persona-Based Content

We write for different stakeholders. Always follow the established styles:

• Funders: ROI, cost logic, and grant-ready "Value Propositions."
• Hospitals: Security, HIPAA, deployment scripts, and runbooks.
• Researchers: Methodological details, GEARS architectures, and scRNA-seq parameters.
• Patients: Plain-language summaries and "What this means for you."

📚 Documentation Hierarchy

• Main Hub: docs/INDEX.md.
• Cross-Reference: Always link to the "Single Source of Truth" files in docs/reference/shared/ (e.g., patientone-profile.md).
• Automation: Templates for automated reporting live in docs/for-developers/automation-guides/.

📧 Specialized Templates

• Email Summaries: Use the formatting in docs/email-summary.md for daily/weekly project status updates.
• Patient Reports: Ensure reports follow the structure in mcp-patient-report to maintain clinical standards.

🎨 Visualization Standards

• Mermaid: Use for all architecture flows. Ensure colors are readable in both light and dark modes.
• Screenshots: Store visual assets in data/images/ and reference with absolute paths where possible.

✍️ Editorial Checklist

• Biological terms are accurately linked to citations.
• PHI/PII is strictly excluded from all public docs.
• New servers are added to the Server Registry.
• Mermaid diagrams remain under 100 nodes for readability.

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Use this skill when:

• Drafting new user guides.
• Updating the System Architecture.
• Creating automated reporting templates for clinicians.