一键在 Manus 中运行任何 Skill

biorxiv-skill

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更新时间2026年6月9日 04:10

Submit compact bioRxiv and medRxiv API requests for details, publication-linkage, and DOI lookups. Use when a user wants concise preprint metadata summaries

安装

用 Codex 或 Claude 帮你安装复制这段 Prompt，粘贴到 Codex、Claude 或其他助手里，让它检查 Skill 页面并帮你完成安装。

在 Manus 中运行

来源

SciMiner

SciMiner/sciminer-skills

打开 GitHub 仓库查看创作者相关仓库

下载

在 Manus 中运行

Operating rules

Use scripts/rest_request.py for all bioRxiv and medRxiv API calls.
Use base_url=https://api.biorxiv.org.
The script accepts max_items; for details and pubs pages, start around max_items=10.
Prefer one cursor page at a time instead of increasing page size or pasting long collections into chat.
Re-run requests in long conversations instead of relying on older tool output.
Treat displayed ... in tool previews as UI truncation, not part of the true request.

Execution behavior

Return concise markdown summaries from the script JSON by default.
Return the raw script JSON only if the user explicitly asks for machine-readable output.
Prefer these paths: details/<server>/<start>/<end>/<cursor>/json, details/<server>/<doi>/na/json, pubs/<server>/<start>/<end>/<cursor>, and pubs/<server>/<doi>/na/json.
If the user needs full page contents, set save_raw=true and report the saved file path rather than pasting large collections into chat.

Input

Read one JSON object from stdin.
Required fields: base_url, path
Optional fields: method, params, headers, json_body, form_body, record_path, response_format, max_items, max_depth, timeout_sec, save_raw, raw_output_path
Common biorxiv patterns:
- {"base_url":"https://api.biorxiv.org","path":"details/biorxiv/2025-03-21/2025-03-28/0/json","record_path":"collection","max_items":10}
- {"base_url":"https://api.biorxiv.org","path":"details/medrxiv/10.1101/2020.09.09.20191205/na/json","record_path":"collection","max_items":10}
- {"base_url":"https://api.biorxiv.org","path":"pubs/medrxiv/2020-03-01/2020-03-30/0","record_path":"collection","max_items":10}

Output

Success returns ok, source, path, method, status_code, warnings, and either compact records or a compact summary.
Use raw_output_path when save_raw=true.
Failure returns ok=false with error.code and error.message.

Execution

echo '{"base_url":"https://api.biorxiv.org","path":"details/biorxiv/2025-03-21/2025-03-28/0/json","record_path":"collection","max_items":10}' | python scripts/rest_request.py

References

No additional runtime references are required; keep the import package limited to this file and scripts/rest_request.py.

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name	biorxiv-skill
description	Submit compact bioRxiv and medRxiv API requests for details, publication-linkage, and DOI lookups. Use when a user wants concise preprint metadata summaries

Operating rules

Use scripts/rest_request.py for all bioRxiv and medRxiv API calls.
Use base_url=https://api.biorxiv.org.
The script accepts max_items; for details and pubs pages, start around max_items=10.
Prefer one cursor page at a time instead of increasing page size or pasting long collections into chat.
Re-run requests in long conversations instead of relying on older tool output.
Treat displayed ... in tool previews as UI truncation, not part of the true request.

Execution behavior

Return concise markdown summaries from the script JSON by default.
Return the raw script JSON only if the user explicitly asks for machine-readable output.
Prefer these paths: details/<server>/<start>/<end>/<cursor>/json, details/<server>/<doi>/na/json, pubs/<server>/<start>/<end>/<cursor>, and pubs/<server>/<doi>/na/json.
If the user needs full page contents, set save_raw=true and report the saved file path rather than pasting large collections into chat.

Input

Read one JSON object from stdin.
Required fields: base_url, path
Optional fields: method, params, headers, json_body, form_body, record_path, response_format, max_items, max_depth, timeout_sec, save_raw, raw_output_path
Common biorxiv patterns:
- {"base_url":"https://api.biorxiv.org","path":"details/biorxiv/2025-03-21/2025-03-28/0/json","record_path":"collection","max_items":10}
- {"base_url":"https://api.biorxiv.org","path":"details/medrxiv/10.1101/2020.09.09.20191205/na/json","record_path":"collection","max_items":10}
- {"base_url":"https://api.biorxiv.org","path":"pubs/medrxiv/2020-03-01/2020-03-30/0","record_path":"collection","max_items":10}

Output

Success returns ok, source, path, method, status_code, warnings, and either compact records or a compact summary.
Use raw_output_path when save_raw=true.
Failure returns ok=false with error.code and error.message.

Execution

echo '{"base_url":"https://api.biorxiv.org","path":"details/biorxiv/2025-03-21/2025-03-28/0/json","record_path":"collection","max_items":10}' | python scripts/rest_request.py

References

No additional runtime references are required; keep the import package limited to this file and scripts/rest_request.py.