datasette-plugin-writer

senior-architect

alirezarezvani

Comprehensive software architecture skill for designing scalable, maintainable systems using ReactJS, NextJS, NodeJS, Express, React Native, Swift, Kotlin, Flutter, Postgres, GraphQL, Go, Python. Includes architecture diagram generation, system design patterns, tech stack decision frameworks, and dependency analysis. Use when designing system architecture, making technical decisions, creating architecture diagrams, evaluating trade-offs, or defining integration patterns.

prospect-research-compiler

gked2121

Aggregate prospect intelligence from multiple sources including news, social media, company websites, and financial data.

kegg-database

K-Dense-AI

Query KEGG REST API for pathway analysis, gene-pathway mapping, metabolic pathways, drug interactions, ID conversion, compound structures, for systems biology and enrichment analysis.

geo-database

K-Dense-AI

Access NCBI GEO for gene expression/genomics data. Search/download microarray and RNA-seq datasets (GSE, GSM, GPL), retrieve SOFT/Matrix files, for transcriptomics and expression analysis.

ensembl-database

K-Dense-AI

Query Ensembl genome database REST API for 250+ species. Gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, VEP predictions, for genomic research.

uniprot-database

K-Dense-AI

Query UniProt protein database REST API. Search proteins by name/gene/accession, retrieve sequences (FASTA), annotations, ID mapping, Swiss-Prot/TrEMBL, GO terms, for protein analysis.

reactome-database

K-Dense-AI

Query Reactome REST API for pathway analysis, enrichment, gene-pathway mapping, disease pathways, molecular interactions, expression analysis, for systems biology studies.

gget

K-Dense-AI

Bioinformatics query toolkit. Gene info (Ensembl/UniProt), BLAST, AlphaFold, ARCHS4 expression, Enrichr, OpenTargets, COSMIC, genome downloads, CLI/Python, for rapid database queries.

prospect-research-compiler

OneWave-AI

Aggregate prospect intelligence from multiple sources including news, social media, company websites, and financial data.

histolab

K-Dense-AI

Digital pathology image processing toolkit for whole slide images (WSI). Use this skill when working with histopathology slides, processing H&E or IHC stained tissue images, extracting tiles from gigapixel pathology images, detecting tissue regions, segmenting tissue masks, or preparing datasets for computational pathology deep learning pipelines. Applies to WSI formats (SVS, TIFF, NDPI), tile-based analysis, and histological image preprocessing workflows.

openai-responses

jezweb

This skill provides comprehensive knowledge for working with OpenAI's Responses API, the unified stateful API for building agentic applications. It should be used when building AI agents that preserve reasoning across turns, integrating MCP servers for external tools, using built-in tools (Code Interpreter, File Search, Web Search, Image Generation), managing stateful conversations, implementing background processing, or migrating from Chat Completions API. Use when building agentic workflows, conversational AI with memory, tools-based applications, RAG systems, data analysis agents, or any application requiring OpenAI's reasoning models with persistent state. Covers both Node.js SDK and Cloudflare Workers implementations. Keywords: responses api, openai responses, stateful openai, openai mcp, code interpreter openai, file search openai, web search openai, image generation openai, reasoning preservation, agentic workflows, conversation state, background mode, chat completions migration, gpt-5, polymorphic outputs

protocolsio-integration

K-Dense-AI

Integration with protocols.io API for managing scientific protocols. This skill should be used when working with protocols.io to search, create, update, or publish protocols; manage protocol steps and materials; handle discussions and comments; organize workspaces; upload and manage files; or integrate protocols.io functionality into workflows. Applicable for protocol discovery, collaborative protocol development, experiment tracking, lab protocol management, and scientific documentation.