research-harness

Maintain and debug the Research Harness Zotero plugin adapter. Trigger on Zotero side panel, Zotero reader, Zotero copy/clipboard, local RH API bridge, PDF attachment, RH-to-Zotero sync, seed-paper previews, plugin restart/dev-refresh, or requests to align Zotero plugin behavior with RH CLI/MCP skills without duplicating existing research workflow skills.

Expand from seed papers by following references and citations inside Research Harness workflows. Trigger on phrases like "citation-trace", "/citation-trace", "引用追踪", "沿引用链扩展", or equivalent requests to grow a paper set from one or more seed papers.

Extract core claims from papers for Research Harness evidence structuring. Trigger on phrases like "claim-extraction", "/claim-extraction", "提取论文声明", "claim extract", or equivalent requests to identify key claims, evidence, assumptions, and limitations from ingested papers.

Decide whether a research stage has enough evidence to advance in Research Harness. Trigger on phrases like "evidence-gating", "/evidence-gating", "证据门控", "现在能推进吗", or equivalent requests to check whether current literature, claims, and artifacts justify moving to the next stage.

Improve Research Harness manuscript figures and visual evidence. Use when a paper/PDF has low-quality figures, placeholder fbox/minipage diagrams, blurry PNGs, weak visual evidence, missing publication-ready graphics, figure/table quality review blockers, or requests to use Codex/ImageGen/GPT Image to generate academic paper figures.

Evaluate and replay final_bundle PDF/LaTeX quality for Research Harness project-level self-evolution. Trigger on phrases like "final bundle quality", "PDF quality replay", "LaTeX quality gate", "AAAI PDF QA", "final_bundle_quality", or equivalent requests to scan publication bundles, classify layout/encoding/recompile defects, and decide whether a skill can be promoted.

Analyze research gaps using Research Harness paper pools and extracted evidence. Trigger on phrases like "gap-analysis", "/gap-analysis", "研究空白分析", "找研究 gap", or equivalent requests to identify underexplored questions, missing baselines, or contradictory findings.

Build a structured literature map in Research Harness. Trigger on phrases like "literature-mapping", "/literature-mapping", "文献地图", "建立文献库", "systematic literature map", or equivalent requests to cluster papers, identify baselines, and organize a topic-level paper pool.

Run comprehensive literature search for Research Harness. Trigger on phrases like "literature-search", "/literature-search", "文献检索", "系统检索论文", "帮我搜相关论文", or equivalent requests to search, shortlist, and ingest relevant papers.

Create PhD-level PDF highlights/comments for newly added Zotero papers or RH PDFs. Trigger when importing/syncing a paper into Zotero, adding a PDF attachment, 精读标注, 论文批注, 博士生读论文, or equivalent requests to make a paper quickly graspable through PDF annotations.

Check paper pool health, enrich metadata, download PDFs, and annotate — with relevance filtering to skip noise

Verify whether papers actually exist and match the claimed metadata before or after ingestion. Trigger on phrases like "paper-verify", "/paper-verify", "验证论文存在性", "核对 DOI arxiv", or equivalent requests to validate titles, identifiers, and source consistency.

论文撰写全流程指导 skill，覆盖六种类型：专项研究、综述、系统/基准、短论文/Workshop、立场论文、科研汇报。融合导师核心原则 + 国际顶会写作方法论。Trigger: write paper, 写论文, 论文撰写, draft paper, paper writing, 写综述, survey writing, 科研汇报, research report, position paper, workshop paper, short paper, 写introduction, 写related work, 写实验, camera-ready, rebuttal, 投稿准备

Review Research Harness execution history, recorded artifacts, and process quality. Trigger on phrases like "provenance-review", "/provenance-review", "溯源审查", "回顾执行历史", or equivalent requests to inspect what was done, what was recorded, and what is missing.

Assemble an evidence-bound publication package from Research Harness artifacts. Trigger on phrases like "publication-pack", "/publication-pack", "投稿材料包", "submission pack", "publication package", "把这个 topic 整理成投稿包", or equivalent requests to turn a topic's evidence, draft sections, figures, citation checks, response letters, and provenance into one reviewable package.

Main entry skill for Research Harness workflows in Codex. Trigger on phrases like "research-harness", "/research-harness", "用 Research Harness", "进入科研工作流", "开始科研流程", or equivalent requests to route the task to topic initialization, literature search, citation tracing, claim extraction, gap analysis, evidence gating, section drafting, publication pack assembly, paper verification, or provenance review.

Initialize a new research topic or new project integration for Research Harness. Trigger on phrases like "research-init", "/research-init", "初始化研究主题", "初始化 Research Harness", "给项目接入 Research Harness", or equivalent requests to create topic scaffolding, update AGENTS or CLAUDE guidance, and ingest seed papers.

Reference guide for core Research Harness public MCP operations

Draft paper sections from Research Harness evidence. Trigger on phrases like "section-drafting", "/section-drafting", "章节起草", "根据证据写 related work", or equivalent requests to produce evidence-backed draft sections tied to ingested papers and extracted claims.

Research task classification and model routing guidance

Use when a user wants Codex to run a long-horizon task with minimal manual intervention, split work into durable worker tasks, monitor execution, quarantine failures, and stop for mobile/human gate approvals.

Record durable Research Harness outputs as orchestrator artifacts with provenance. Trigger on phrases like "rh-artifact-record", "/rh-artifact-record", "记录 artifact", "产出入库", "save RH artifact", or when a research output should not remain only in chat/files.

Create a compact Codex checkpoint before context pressure, compaction, handoff, or a new large Research Harness phase. Trigger on phrases like "rh-codex-checkpoint", "/compact", "checkpoint", "上下文压缩", "handoff", or when visible context is low.

Verify Codex workflow/config/skill changes in research-harness-oss. Trigger on phrases like "rh-codex-verify", "/rh-codex-verify", "run codex-check", "验证 Codex 配置", or before handing off Codex-authored changes.

Resume an existing Research Harness topic/session in Codex without restarting work. Trigger on phrases like "rh-session-resume", "/rh-session-resume", "接手已有 topic", "继续上次 Research Harness", "resume RH topic", or equivalent requests to recover current state before acting.