protocol-extraction-from-pdf

# Protocol Extraction from PDF ## Usage ```python import asyncio import json from mcp.client.streamable_http import streamablehttp_client from mcp import ClientSession class ThothClient: def __init__(self, server_url: str): self.server_url = server_url self.session = None async def connect(self): try: self.transport = streamablehttp_client(url=self.server_url, sse_read_timeout=60 * 10) self.read, self.write, self.get_session_id = await self.transport.__aenter__() self.session_ctx = ClientSession(self.read, self.write) self.session = await self.session_ctx.__aenter__() await self.session.initialize() return True except Exception as e: return False async def disconnect(self): if self.session: await self.session_ctx.__aexit__(None, None, None) if hasattr(self, 'transport'): await self.transport.__aexit__(None, None, None) def parse_result(self, result): try: if hasattr(result, 'content') and result.content: content = result.content[0] if hasattr(content, 'text'): return json.loads(content.text) return str(result) except: try: return result.content[0].text except: return {"error": "parse error", "raw": str(result)} ## Initialize and use client = ThothClient("https://scp.intern-ai.org.cn/api/v1/mcp/19/Thoth-Plan") await client.connect() # PDF URL (must be publicly accessible) pdf_url = "https://example.com/protocol.pdf" result = await client.session.call_tool("extract_protocol_from_pdf", arguments={"pdf_url": pdf_url}) protocol = client.parse_result(result) print("Extracted Protocol:") print(protocol) await client.disconnect() ``` ### Tool: `extract_protocol_from_pdf` - Args: `pdf_url` (str) - Public URL to PDF file - Returns: Structured protocol text with numbered steps ### Use Cases - Lab protocol digitization, SOP extraction, experimental workflow documentation