Review source files changed during a phase for bugs, security issues, and code quality problems
Archive accumulated phase directories from completed milestones
Archive completed milestone and prepare for next version
Configure GSD settings — workflow toggles, advanced knobs, integrations, and model profile
Systematic debugging with persistent state across context resets
Build, query, and inspect the project knowledge graph in .planning/graphs/
Diagnose planning directory health and optionally repair issues
File a phase artifact into MemPalace; mirror decision facts into its temporal KG