github-oauth-nango-integration

name	github-oauth-nango-integration
description	Use when implementing GitHub OAuth + GitHub App authentication with Nango - provides two-connection pattern for user login and repo access with webhook handling
metadata	{"author":"agentworkforce"}

GitHub OAuth + Nango Integration

Overview

Implements dual-connection OAuth pattern: one for user identity (github integration), another for repository access (github-app-oauth integration). This separation enables secure login while maintaining granular repo permissions through GitHub App installations.

When to Use

• Setting up GitHub OAuth login via Nango
• Implementing GitHub App installation webhooks
• Reconciling OAuth users with GitHub App installations
• Building apps that need both user auth and repo access
• Handling Nango sync webhooks for GitHub data

Why Two Connections?

GitHub has two different authentication mechanisms that serve different purposes:

GitHub OAuth App (github integration)

• What it is: Traditional OAuth for user identity
• What it gives you: User profile (name, email, avatar, GitHub ID)
• What it DOESN'T give you: Access to repositories
• Use for: Login, "Sign in with GitHub"

GitHub App (github-app-oauth integration)

• What it is: Installable app with granular repo permissions
• What it gives you: Access to specific repos the user installed it on
• What it DOESN'T give you: User identity (it knows the installation, not who's using it)
• Use for: Reading PRs, commits, files; posting comments; webhooks

The Reconciliation Problem

OAuth App alone:  "User [e-mail] logged in" → but which repos can they access?
GitHub App alone: "Installation #12345 has access to repo X" → but who is the user?

Solution: Two separate OAuth flows linked by user ID:

1. Login flow → User authenticates → Store user identity + nangoConnectionId
2. Repo flow → Same user authorizes app → Store repos + link via ownerId

This lets you answer: "User [e-mail] can access repos X, Y, Z"

Quick Reference

Connection Type	Nango Integration	Purpose	Stored In
User Login	github	Authentication, identity	users.nangoConnectionId
Repo Access	github-app-oauth	PR operations, file access	repos.nangoConnectionId

Flow	Endpoint	Webhook Type
Login	GET /auth/nango-session	auth + github
Repo Connect	GET /auth/github-app-session	auth + github-app-oauth
Data Sync	N/A (scheduled)	sync

Implementation

1. Database Schema

// users table - stores login connection
export const users = pgTable('users', {
  id: uuid('id').primaryKey().defaultRandom(),
  githubId: text('github_id').unique().notNull(),
  githubUsername: text('github_username').notNull(),
  email: text('email'),
  avatarUrl: text('avatar_url'),
  nangoConnectionId: text('nango_connection_id'),      // Permanent login connection
  incomingConnectionId: text('incoming_connection_id'), // Temp polling connection
  pendingInstallationRequest: timestamp('pending_installation_request'), // Org approval wait
});

// repos table - stores per-repo app connection
export const repos = pgTable('repos', {
  id: uuid('id').primaryKey().defaultRandom(),
  githubRepoId: text().().(),
  : ().(),
  : ().( githubInstallations.),
  : ().( users.),
  : (),  
});


  githubInstallations = (, {
  : ().().(),
  : ().().(),
  : (),   
  : (),
  : ().( users.),
});

2. Constants

// constants.ts
export const NANGO_INTEGRATION = {
  GITHUB_USER: 'github',              // Login only
  GITHUB_APP_OAUTH: 'github-app-oauth' // Repo access
} as const;

3. Login Flow Routes

// GET /auth/nango-session - Create login OAuth session
app.get('/auth/nango-session', async (c) => {
  const tempUserId = randomUUID();

  const { sessionToken } = await nangoClient.createConnectSession({
    end_user: { id: tempUserId },
    allowed_integrations: [NANGO_INTEGRATION.GITHUB_USER],
  });

  return c.json({ sessionToken, tempUserId });
});

// GET /auth/nango/status/:connectionId - Poll login completion
app.get('/auth/nango/status/:connectionId', async (c) => {
  const { connectionId } = c.req.param();

  // Check if user exists with this incoming connection
  const user = await userRepo.findByIncomingConnectionId(connectionId);
  if (!user) {
    return c.json({ ready: false });
  }

  // Issue JWT and return
  const token = authService.issueToken(user);
  await userRepo.clearIncomingConnectionId(user.id);

  return c.json({ ready: true, token, user });
});

4. App OAuth Flow Routes

// GET /auth/github-app-session - Create app OAuth session (authenticated)
app.get('/auth/github-app-session', authMiddleware, async (c) => {
  const user = c.get('user');

  const { sessionToken } = await nangoClient.createConnectSession({
    end_user: { id: user.id, email: user.email },
    allowed_integrations: [NANGO_INTEGRATION.GITHUB_APP_OAUTH],
  });

  return c.json({ sessionToken });
});

// GET /auth/github-app/status/:connectionId - Poll repo sync
app.get('/auth/github-app/status/:connectionId', authMiddleware, async (c) => {
  const user = c.get('user');

  // Check for pending org approval
  if (user.pendingInstallationRequest) {
    return c.json({ ready: false, pendingApproval: true });
  }

  // Check if repos synced
  const repos = await repoRepo.findByOwnerId(user.id);
  return c.json({ ready: repos.length > 0, repos });
});

5. Auth Webhook Handler

// auth-webhook-service.ts
export async function handleAuthWebhook(payload: NangoAuthWebhook): Promise<boolean> {
  const { connectionId, providerConfigKey, endUser } = payload;

  if (providerConfigKey === NANGO_INTEGRATION.GITHUB_USER) {
    return handleLoginWebhook(connectionId, endUser);
  }

  if (providerConfigKey === NANGO_INTEGRATION.GITHUB_APP_OAUTH) {
    return handleAppOAuthWebhook(connectionId, endUser);
  }

  return false;
}

async function handleLoginWebhook(connectionId: string, endUser?: EndUser) {
  // Fetch GitHub user info via Nango
  const githubUser = await nangoService.getGitHubUser(connectionId);

  // Check if user exists
  const existingUser = await userRepo.findByGitHubId(String(githubUser.id));

  if (existingUser) {
    // Returning user - store temp connection for polling
    await userRepo.update(existingUser.id, {
      : connectionId,
    });
    
     nangoService.(connectionId);
  }  {
    
     user =  userRepo.({
      : (githubUser.),
      : githubUser.,
      : githubUser.,
      : githubUser.,
      : connectionId,
      : connectionId,
    });

    
     nangoService.(connectionId, {
      : { : user., : user. },
    });
  }

   ;
}

  () {
   userId = endUser?.;
   (!userId)   ();

   user =  userRepo.(userId);
   (!user)   ();

   {
    
     repos =  githubService.(connectionId);

    
     ( repo  repos) {
       repoRepo.({
        : (repo.),
        : repo.,
        : user.,
        : connectionId,
      });
    }

    
     nangoService.(connectionId, [, ]);

  }  (error) {
     (error. === ) {
      
       userRepo.(user., {
        :  (),
      });
       ; 
    }
     error;
  }

   ;
}

6. Webhook Route with Signature Verification

// webhooks.ts
app.post('/api/webhooks/nango', async (c) => {
  const signature = c.req.header('X-Nango-Signature');
  const body = await c.req.text();

  // Verify signature
  const expectedSignature = createHmac('sha256', NANGO_SECRET_KEY)
    .update(body)
    .digest('hex');

  if (signature !== expectedSignature) {
    return c.json({ error: 'Invalid signature' }, 401);
  }

  const payload = JSON.parse(body);

  if (payload.type === 'auth') {
    const success = await handleAuthWebhook(payload);
    return c.json({ success });
  }

  if (payload.type === 'sync') {
    await processSyncWebhook(payload);
    return c.json({ success: true });
  }

  return c.json({ success:  });
});

7. Frontend Integration

// Login flow
async function handleLogin() {
  const res = await fetch('/api/auth/nango-session');
  const { sessionToken } = await res.json();

  const nango = new Nango({ connectSessionToken: sessionToken });

  nango.openConnectUI({
    onEvent: async (event) => {
      if (event.type === 'connect') {
        // Poll for completion
        const result = await pollForAuth(event.payload.connectionId);
        if (result.ready) {
          localStorage.setItem('token', result.token);
          navigate('/dashboard');
        }
      }
    },
  });
}

// Repo connection flow (after login)
async function handleConnectRepos() {
  const res = await fetch('/api/auth/github-app-session', {
    headers: { Authorization: `Bearer ${token}` },
  });
   { sessionToken } =  res.();

   nango =  ({ : sessionToken });

  nango.({
    :  (event) => {
       (event. === ) {
         result =  (event..);
         (result.) {
          ();
        }   (result.) {
          (result.);
        }
      }
    },
  });
}

Complete Flow Diagram

USER LOGIN:
  Frontend → GET /auth/nango-session
           → Nango.openConnectUI(sessionToken)
           → User authorizes GitHub
           → Nango webhook (type: auth, providerConfigKey: github)
           → Backend creates/updates user
           → Frontend polls /auth/nango/status/:connectionId
           → Returns JWT token

REPO CONNECTION (authenticated):
  Frontend → GET /auth/github-app-session (with JWT)
           → Nango.openConnectUI(sessionToken)
           → User authorizes GitHub App
           → Nango webhook (type: auth, providerConfigKey: github-app-oauth)
           → Backend fetches repos, syncs to DB
           → Frontend polls /auth/github-app/status/:connectionId
           → Returns repos list

DATA SYNCS (background):
  Nango → Scheduled sync every 4 hours
        → Webhook (type: sync, model: GithubPullRequest)
        → Backend processes incremental updates

Common Mistakes

Mistake	Fix
Using same connection for login and repo access	Use two integrations: github for login, github-app-oauth for repos
Not handling org approval pending	Check for 403 error, set pendingInstallationRequest flag
Missing endUser.id in connection	Always set in createConnectSession, update after user creation
Polling wrong connection ID	Store incomingConnectionId separately for returning users
Not verifying webhook signature	Always verify X-Nango-Signature with HMAC-SHA256
Keeping duplicate connections	Delete temp connection after returning user authenticates

Environment Variables

# Required
NANGO_SECRET_KEY=your-nango-secret-key
JWT_SECRET=your-jwt-secret-min-32-chars
DATABASE_URL=postgres://...

# Configure in Nango Dashboard
# - github integration: OAuth App credentials
# - github-app-oauth integration: GitHub App credentials

Nango Dashboard Setup

1. Create github integration (for login):

   • Type: OAuth2
   • Client ID/Secret: From GitHub OAuth App
   • Scopes: read:user, user:email

2. Create github-app-oauth integration (for repos):

   • Type: GitHub App
   • App ID, Private Key, Client ID/Secret: From GitHub App
   • Scopes: repo, pull_request, etc.

3. Configure webhook URL: https://your-domain/api/webhooks/nango

4. Enable syncs: pull-requests, commits, issues, etc.

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