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ai4s-research
GitHub creator profile

ai4s-research

Repository-level view of 15 collected skills across 2 GitHub repositories.

skills collected
15
repositories
2
updated
2026-07-09
repository explorer

Repositories and representative skills

modal-run
software-developers

Use when the user asks to run heavy or GPU work on Modal (the cloud compute platform) — writing a Modal function in the workspace, running it with the user's own `modal` CLI + token, and bringing results back. Data-to-compute for jobs too big for the laptop, without a Slurm cluster.

2026-07-09
remote-compute
network-and-computer-systems-administrators

Use when the user asks to run, submit, monitor, or cancel a job on a remote machine over SSH — their own GPU/CPU server, a workstation, or a Slurm cluster ("the cluster", a login node, "my 3090 box", "the compute server"). Picks a saved machine, runs the work directly over SSH (or via Slurm when present), tracks it, and fetches results back into the workspace.

2026-07-09
domain-check
software-quality-assurance-analysts-and-testers

Use whenever you write or run scientific analysis code (physics, earth/geo, biology, chemistry, or social science) in this workspace — before executing it and again after generating results. Runs a deterministic domain-correctness gate that catches code which runs but is scientifically wrong (unit/dimension mismatch, Euclidean distance on lat/lon without a CRS, 0-based/1-based coordinate and strand errors, impossible SMILES valence, uncorrected multiple comparisons, averaging a categorical code). Surfaces structured findings; never claims the code is correct.

2026-07-06
large-file
software-developers

Use BEFORE reading any data file that could be large (CSV/TSV, Parquet, HDF5, FITS, NetCDF, NDJSON, genomics FASTQ/FASTA/VCF/BAM, GRIB, ROOT, or big text/simulation logs like VASP OUTCAR). Returns a compact memory pointer — header/schema/shape/sample/key numbers — by introspection and sampling in bounded memory, so you never load a file bigger than the context window into the model. Reference data via the pointer; read specific ranges deterministically.

2026-07-06
stats-integrity
data-scientists-152051

Use whenever you run statistical analysis for the social sciences (regression, hypothesis tests, econometrics) or read Stata (.dta) / SPSS (.sav) data in this workspace. Enforces an execute-don't-interpret boundary (surface estimates, don't volunteer causal claims), checks the analysis against a preregistration plan for HARKing, verifies reproducible seeds, and reproduces .dta/.sav estimates via R. Flags integrity risks; never certifies the analysis is sound.

2026-07-06
traceability-review
editors

Use when the user asks to review, verify, or audit a report, manuscript, or analysis in the workspace for traceability — resolving citations, flagging numbers with no source, and checking figures against the code that generated them. Emits a structured review block the app renders as reviewer findings. Verifies traceability, never "correctness".

2026-07-06
publication-figures
software-developers

Use whenever you generate a chart, plot, or figure with matplotlib (or seaborn) in this workspace. Applies the Open Science publication figure style so every generated figure is publication-grade and shares one palette with the app's native charts. Not for interactive plotly/HTML — those follow the same palette manually.

2026-07-04
my-skill
software-developers

A test skill that says hello. Use when you want to test skill loading or verify that the skill system is working.

2026-07-03
mindmap-render
software-developers

Generate beautiful, high-resolution mindmaps from Markdown unordered lists. Outputs interactive HTML, HD PNG, and PDF with colorful branch themes.

2026-07-06
integrity-auditor
postsecondary-teachers-all-other

Use when the user wants a paper audited for integrity issues — image misuse, numerical anomalies, logical gaps — and needs a reviewable evidence report. Works on external papers (PDF / DOI / arXiv) and on outputs from a local paper-writer run. Single-stage skill.

2026-07-03
experiment-suite
data-scientists-152051

Use when the user has a research question and needs a complete experiment package — design document, runnable code, results (measured or simulated with honest provenance), publication-grade figures, structured report. Single-stage, no Python runtime.

2026-07-01
ai4s-agent
software-developers

Use when the user wants an end-to-end AI4S research pipeline — broad direction or specific topic in, full research package out (exploration + literature survey + experiment + paper). Meta-skill that chains the four downstream skills in order. Pure markdown, no Python runtime.

2026-06-28
literature-survey
postsecondary-teachers-all-other

Use when the user wants a comprehensive literature survey on a specific research topic. Outputs a complete PDF survey (6–20 pages, 60+ real citations, 100+ recommended) with LaTeX source, taxonomy figures, and a classified literature table. Single-stage, no Python runtime.

2026-06-28
paper-writer
technical-writers

Use when the user wants a complete, publication-grade research paper on a specific topic — produces 200+ real citations, 4–8 publication-grade figures, and 7 sections of substantive prose compiled to PDF in one pass. No skeleton stage.

2026-06-28
research-explorer
market-research-analysts-and-marketing-specialists-131161

Use when the user has a vague research direction and wants to explore feasible specific topics. Outputs a structured analysis with candidate topics, innovation/feasibility scoring, and a pre-survey of 20–30 representative works. Single-stage, no Python runtime.

2026-06-28
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