This skill should be used when the user asks to "generate theories", "theorize about", "what theories explain", "form scientific theories", "literature-driven theories", "hypothesize", "form hypotheses", "generate hypotheses", "what hypotheses explain", "run the theorizer", or wants AI-generated, literature-grounded scientific theories or hypotheses about a research question.
Show the user the agent's work on a research project and save iterations on the user's behalf. Scaffold rendering and deploy infrastructure (Quarto today, GitHub Pages, dev container), show the rendered output, save iterations. Doesn't handle research execution (use `research-step`).
Look up or search papers, authors, citations, and full-text snippets on Semantic Scholar. Use for fast, targeted queries about a paper, author, or specific named research artifact (benchmark, dataset, model, method, etc.) — not comprehensive reports.
Local document metadata index for files used by Asta skills and tools. Use this skill when the user asks to store a document "in Asta" or retrieve "from Asta". Use it when the user references an "Asta document" or anything with an `asta://` URI.
Create, configure, and monitor AutoDiscovery runs. Use when the user asks about their runs, experiments, discoveries, wants to check status, or wants to start a new discovery run.
Run scientific (software) experiments. Use when the user asks to "run an experiment", "run an investigation", or "research with Asta." Also use this skill to analyze experimental data generate a research report from it. The user may refer to this system by its internal project name, "Panda."
This skill should be used when the user asks to "find papers", "search for papers", "what does the literature say", "find research on", "academic papers about", "literature review", "cite papers", or needs to answer questions using academic literature.
Build a searchable Asta document index from a collection of local PDF files. Use when the user asks to "index these PDFs", "put these PDFs into an Asta index", "index these PDFs using Asta", "build a local paper index", "make these PDFs searchable", or "create an index from these papers".