cellxgene-census

Query the CELLxGENE Census (61M+ cells) programmatically. Use when you need expression data across tissues, diseases, or cell types from the largest curated single-cell atlas. Best for population-scale queries, reference atlas comparisons. For analyzing your own data use scanpy or scvi-tools.

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Repository: strmt7/ai_skills_collection_benchmarked
Last source activity: April 17, 2026 at 21:49
Detected SKILL.md language: English
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name	cellxgene-census
description	Query the CELLxGENE Census (61M+ cells) programmatically. Use when you need expression data across tissues, diseases, or cell types from the largest curated single-cell atlas. Best for population-scale queries, reference atlas comparisons. For analyzing your own data use scanpy or scvi-tools.
source_skill_id	k-dense-ai-scientific-agent-skills-scientific-skills-cellxgene-census-skill-md
category	Science, research & data analysis
source_mirror	../../../../../skills/by-category/science-research-data-analysis/latest-release-community/cellxgene-census/SKILL.md
benchmark_status	artifact_gated