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Create complete AI instruction documentation for an R/Bioconductor package in .github/instructions/
Install with Codex or Claude Copy this prompt, paste it into Codex, Claude, or another assistant, and let it review the skill page and install it for you.
Based on SOC occupation classification
Analyze R/Bioconductor package structure to extract key information about its purpose, exports, and characteristics
Verify that waldronlab/ai-agent-skills are available and help users find the right skill
Update existing AI instruction documentation when an R/Bioconductor package changes
Validate that a skill conforms to the ai-agent-skills repository standards
Help create a new AI agent skill through collaborative Q&A
Automate documentation updates to SKILLS.md after creating or modifying a skill
| name | create-package-instructions |
| description | Create complete AI instruction documentation for an R/Bioconductor package in .github/instructions/ |
| version | 1.0.0 |
| category | r-packages |
| tags | ["r-packages","documentation","bioconductor"] |
| author | waldronlab |
Create complete AI instruction documentation for an R/Bioconductor package in .github/instructions/.
Invoke this skill when you want to generate AI-friendly documentation for an R package:
analyze-r-package to understand the package structure.templates/package-instructions/:
00-overview.md.template (Always)10-data-access.md.template (If Type: Remote or Hybrid)20-development.md.template (Always)30-testing-and-docs.md.template (Always)40-vignettes.md.template (If Vignettes > 0)INDEX.md.template (Always).github/instructions/ exists.{{VARIABLE_NAME}} using the analysis output (refer to templates/package-instructions/README.md for mappings). Write the results to .github/instructions/..github/instructions/ is NOT ignored in .gitignore.^\.github/instructions$ to .Rbuildignore.update-package-instructions.analyze-r-packageupdate-package-instructionsRelated: See analyze-r-package, update-package-instructions.