resume-analysis

name	resume-analysis
description	Resume an interrupted analysis pipeline by reading pipeline state and continuing from the next ready agents. Triggered when users say "/resume-analysis", "continue previous analysis", or "resume the pipeline".

Skill: Resume Pipeline

Purpose

Resume an interrupted analysis pipeline by reading working/pipeline_state.json, determining which agents completed, and continuing from the next READY agents using the DAG walker.

When to Use

Invoke as /resume-analysis when:

• A previous analysis session was interrupted (context limit, user break, connection issue)
• The user wants to continue an analysis started in a prior conversation
• Pipeline state file exists from a partially completed run
• A pipeline failed and the underlying issue has been fixed

Instructions

Step 1: Locate pipeline state (per-run directory aware)

Search for the most recent pipeline state in this order:

1. Per-run directory (preferred): Check working/latest/pipeline_state.json (symlink to latest run). If found, set RUN_DIR from the symlink target and proceed to Step 2.
2. Specific run: If the user passed a run ID (e.g., /resume-analysis 2026-02-23_acme-analytics_why-revenue-dropped), look in working/runs/{id}/pipeline_state.json. Set RUN_DIR accordingly.
3. Legacy location: Check working/pipeline_state.json (pre-run-directory pipelines). If found, read it and proceed to Step 2 without a RUN_DIR.
4. No state found: Fall back to artifact scanning (Step 1b).

Pipeline state fields to extract (V2):

• run_id -- identifies this run
• run_dir -- per-run directory path (may be absent for legacy runs)
• dataset -- active dataset
• question -- the business question
• status -- running, paused, or failed
• agents -- map of agent-name to agent state (status, output_file, timestamps)

Step 1a: V1-to-V2 state migration

After loading the state file and before any processing, check whether the state uses the V1 (step-number keyed) format and migrate it to V2 if needed.

from helpers.pipeline_state import detect_schema_version, migrate_v1_to_v2

if detect_schema_version(state) < 2:
    # Resolve dataset from active.yaml or fall back to "unknown"
    dataset = state.get("dataset") or resolve_active_dataset() or "unknown"
    state = migrate_v1_to_v2(state, dataset=dataset)
    # Write migrated state back to disk (same location it was read from)
    write_pipeline_state(state_path, state)
    print("Migrated pipeline state from V1 -> V2 format")

Migration details (handled by helpers/pipeline_state.py):

• pipeline_id (ISO timestamp) -> started_at; generate run_id from date + dataset + question slug
• steps.{n}.agent keys -> agents.{agent_name} keys
• steps.{n}.output_files[0] -> agents.{name}.output_file (take first)
• Status values are preserved as-is (compatible between V1 and V2)
• Adds schema_version: 2 and updated_at set to current time
• If any V1 step had status: running, it becomes paused at the pipeline level (was interrupted)

After migration, continue with the V2 fields listed above.

Step 1b: Artifact-based fallback (no pipeline_state.json)

If no state file exists, scan working/ and outputs/ for artifacts:

Agent	Expected Artifact	Directory
question-framing	question_brief_*.md	outputs/
hypothesis	hypothesis_doc_*.md	outputs/
data-explorer	data_inventory_*.md	outputs/
source-tieout	tieout_*.md	working/
descriptive-analytics	analysis_report_*.md	outputs/
root-cause-investigator	investigation_*.md	working/
validation	validation_*.md	outputs/
opportunity-sizer	sizing_*.md	working/
story-architect	storyboard_*.md	working/
narrative-coherence-reviewer	coherence_review_*.md	working/
chart-maker	charts/*.png	outputs/
visual-design-critic	design_review_*.md	working/
storytelling	narrative_*.md	outputs/
deck-creator	deck_*.md	outputs/

Walk the list top to bottom. If an artifact exists and looks complete (not empty, no "NEEDS REVISION" markers), mark that agent as completed. Reconstruct a pipeline_state.json from this scan.

Step 2: Compute READY set from DAG

1. Read agents/registry.yaml to build the dependency graph
2. For each agent in the registry, check state["agents"][agent_name]["status"]:
   • If status is complete, skipped, or degraded → leave it
   • If status is failed → reset to pending (will be retried)
   • If status is in_progress or running → reset to pending (was interrupted)
3. Compute READY agents: those with status: pending whose every dependency is complete

Step 3: Build context summary

Read each completed agent's output files and extract a brief summary:

• From question brief: the framed question and decision context
• From analysis report: key findings (top 3)
• From storyboard: narrative beats and visual plan
• From validation: confidence grade

Compile into a context block for the resumed session.

Step 4: Present resume plan

Display:

Resuming pipeline {run_id}

Completed agents: {count}
  - {agent_name}: {one-line summary from outputs}
  - ...

Failed/interrupted agents (will retry): {count}
  - {agent_name}: {error or "interrupted"}

Next READY agents: {list}

Resume execution?

Step 5: Resume via DAG walker

On confirmation:

1. Update pipeline_state.json: set status: running, reset failed/running to pending
2. Hand off to the DAG walker in run-pipeline skill (Phase 2)
3. The walker will pick up from the READY set and continue tier-by-tier
4. All existing completed outputs are preserved — only pending agents execute

Special Cases

• Storyboard with "NEEDS ADDITIONS": Mark story-architect as pending, not completed
• Partial chart generation: Count generated charts vs storyboard beats. If incomplete, mark chart-maker as pending
• Source tie-out FAIL: Mark as failed. User must investigate before resuming
• Stale data (>24h gap): Warn that underlying data may have changed since the original run

Limitations

• Context gap: Resuming restores artifacts but not conversational reasoning. The resumed analysis may be slightly less coherent than a single-session run.
• No partial step recovery: If an agent was interrupted mid-execution, the entire agent must re-run.
• Pipeline state is authoritative: If pipeline_state.json and artifacts disagree, trust pipeline_state.json.