check-reporting

name	check-reporting
description	Check manuscript compliance with medical research reporting guidelines. Supports 49 guidelines including STROBE, STROBE-MR, RECORD, REMARK (prognostic tumor-marker studies), TARGET (target trial emulation), GATHER (burden-of-disease / health-estimate modeling), CONSORT, CONSORT-AI, STARD, STARD-AI, TRIPOD, TRIPOD+AI, TRIPOD-LLM, PGS-RS, ARRIVE, PRISMA, PRISMA 2020 for Abstracts, PRISMA-DTA, PRISMA-P, PRISMA-ScR (scoping reviews), CARE, SPIRIT, SPIRIT-AI, CLAIM, DECIDE-AI, MI-CLEAR-LLM, SQUIRE 2.0, CLEAR, MOOSE, GRRAS, SWiM, AMSTAR 2, CHEERS 2022, CROSS (survey studies), SRQR and COREQ (qualitative research), and risk of bias tools (QUADAS-3, QUADAS-2, QUADAS-C, RoB 2, ROBINS-I, ROBINS-E, ROBIS, ROB-ME, PROBAST, PROBAST+AI, NOS, COSMIN, RoB NMA). Generates item-by-item assessment with PRESENT/MISSING/PARTIAL status.
triggers	checklist, QUADAS-3, abstract checklist, structured abstract, reporting guideline, STROBE, STROBE-MR, Mendelian randomization, CONSORT, CONSORT-AI, STARD, STARD-AI, TRIPOD, TRIPOD-LLM, PGS-RS, PRS-RS, polygenic risk score, polygenic score, PRISMA, PRISMA-DTA, PRISMA-P, PRISMA-ScR, scoping review, scoping, evidence map, ARRIVE, CARE, CLAIM, DECIDE-AI, MI-CLEAR-LLM, SPIRIT, SPIRIT-AI, QUADAS, QUADAS-C, RoB, ROBINS, ROBINS-E, ROBIS, ROB-ME, PROBAST, NOS, COSMIN, AMSTAR, SWiM, CHEERS, economic evaluation, cost-effectiveness, cost-utility, QALY, ICER, RECORD, RECORD-PE, routinely-collected data, registry, claims, electronic health records, EHR, real-world data, CROSS, CHERRIES, survey, questionnaire, KAP, e-survey, response rate, SRQR, COREQ, qualitative research, interviews, focus groups, thematic analysis, grounded theory, reflexivity, REMARK, tumor marker, prognostic marker, prognostic biomarker, molecular residual disease, TARGET, target trial emulation, target trial, causal inference, estimand, immortal time bias, GATHER, burden of disease, global burden, GBD, health estimates, attributable burden, comparative risk assessment, population attributable fraction, disability-adjusted life years, DALY, forecasting, decomposition, risk of bias, compliance check, LLM accuracy, large language model, clinical deployment
tools	Read, Write, Edit, Bash, Grep, Glob
model	inherit

Check-Reporting Skill

You are helping a medical researcher verify that their manuscript complies with the appropriate medical research reporting guideline. You perform a systematic, item-by-item audit and produce a compliance report suitable for journal submission.

Communication Rules

• Communicate with the user in their preferred language.
• Checklist items and report output are in English (matching guideline originals).
• Medical terminology is always in English.

Reference Files

• Checklists (bundled, open license): ${CLAUDE_SKILL_DIR}/references/checklists/
  • STROBE.md -- observational studies (CC BY)
  • STROBE_MR.md -- Mendelian randomization studies, STROBE-MR 2021 (base STROBE + MR extension; CC BY, Davey Smith et al. BMJ 2021)
  • STARD.md -- diagnostic accuracy studies (CC BY 4.0)
  • STARD_AI.md -- AI diagnostic accuracy studies (CC BY, Sounderajah et al. Nat Med 2025)
  • TRIPOD.md -- prediction models, classic 2015 version (no open licence — © ACP; Moons et al. Ann Intern Med 2015)
  • TRIPOD_AI.md -- prediction models with AI/ML (CC BY 4.0, Collins et al. BMJ 2024)
  • TRIPOD_LLM.md -- studies using large language models, TRIPOD-LLM 2025 (educational summary, Gallifant et al. Nat Med 2025)
  • PGS_RS.md -- polygenic (risk) score prediction studies, PGS-RS / PRS-RS 2021 (educational summary, Wand et al. Nature 2021)
  • CHEERS_2022.md -- health economic evaluations (cost-effectiveness / cost-utility / cost-benefit / budget-impact), CHEERS 2022 (CC BY 4.0, Husereau et al. BMJ 2022)
  • RECORD.md -- observational studies using routinely-collected health data (claims / EHR / registries / health-checkup DBs, linked or not), RECORD 2015 (base STROBE + RECORD extension; CC BY 4.0, Benchimol et al. PLoS Med 2015; RECORD-PE for drug studies)
  • CROSS.md -- survey / questionnaire studies (KAP, physician/patient, cross-sectional, e-surveys), CROSS 2021 (in-house faithful summary of item intents, Sharma et al. JGIM 2021) + CHERRIES (CC BY, Eysenbach JMIR 2004) for internet surveys
  • PRISMA_ScR.md -- scoping reviews (map the breadth/nature of evidence, clarify concepts, identify gaps; PCC framing, charting, optional appraisal), PRISMA-ScR 2018 (in-house faithful summary of item intents, Tricco et al. Ann Intern Med 2018; DOI 10.7326/M18-0850)
  • SRQR.md -- qualitative research, all approaches (ethnography / grounded theory / phenomenology / case study / narrative), SRQR 2014, 21 items (in-house faithful summary of item intents, O'Brien et al. Acad Med 2014; DOI 10.1097/ACM.0000000000000388)