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BaranziniLab
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BaranziniLab

Repository-Ansicht von 586 gesammelten Skills in 33 GitHub-Repositories.

gesammelte Skills
586
Repositories
33
aktualisiert
2026-07-15
Hier werden die Top 8 Repositories angezeigt; die vollständige Repository-Liste folgt darunter.
Repository-Explorer

Repositories und repräsentative Skills

computational-fluid-dynamics
Maschinenbauingenieure

Plan and review computational fluid dynamics workflows with meshes, boundary conditions, turbulence models, OpenFOAM/FluidSim-style solvers, validation cases, convergence checks, and reproducible simulation artifacts. Use when users mention CFD, fluid dynamics, Navier-Stokes, meshing, turbulence, OpenFOAM, or flow simulation.

2026-07-01
arbor-optimization
Softwareentwickler

Run evaluator-driven hypothesis trees for improving research artifacts, prompts, analyses, and designs. Use when a task needs branch-and-prune exploration, rubric scoring, iterative refinement, or explicit comparison of competing scientific/workflow alternatives.

2026-07-01
autoskill-workflow-discovery
Sonstige Computerberufe

Detect repeated user workflows and draft native BioRouter skills, hooks, or checklist updates from observed work patterns. Use when users ask to turn repeated work, screen-history patterns, project routines, or recurring guardrails into reusable BioRouter skills.

2026-07-01
bids-neuroimaging
Sonstige Biowissenschaftler

Plan and audit BIDS neuroimaging datasets, derivatives, validation, metadata, and reproducible preprocessing. Use when users mention BIDS, fMRI, MRI, EEG/MEG/iEEG, DICOM conversion, dataset_description.json, participants.tsv, or neuroimaging derivatives.

2026-07-01
clinical-ai-modeling
Datenwissenschaftler

Plan and review clinical AI modeling workflows with EHR cohorts, PyHealth-style tasks, validation, bias checks, calibration, safety boundaries, and no-PHI handling. Use when users ask about clinical prediction models, risk scores, treatment-response ML, medical reports, or clinical model evaluation.

2026-07-01
general-time-series-forecasting
Datenwissenschaftler

Plan and review general time-series forecasting with classical models, ML, foundation models, backtesting, leakage checks, and uncertainty. Use for non-omics forecasting, sensor streams, operations, finance, clinical vitals, demand, or irregular temporal data.

2026-07-01
hugging-science-resource-discovery
Sonstige Computerberufe

Find and evaluate Hugging Face scientific models, datasets, Spaces, and papers with license, provenance, benchmark, and fit checks. Use when users ask for scientific ML resources, model cards, datasets, embeddings, checkpoints, or reproducible AI assets from Hugging Face.

2026-07-01
molecular-dynamics
Biochemiker und Biophysiker

Plan and review molecular dynamics simulations and trajectory analysis with OpenMM, GROMACS, AmberTools, MDAnalysis, MDTraj, and reproducibility checks. Use when users ask about MD setup, force fields, equilibration, production runs, trajectories, RMSD/RMSF, or binding/stability dynamics.

2026-07-01
Zeigt die Top 8 von 544 gesammelten Skills in diesem Repository.
about-biorouter
Sonstige Computerberufe

Built-in self-knowledge about Biorouter. Load this skill whenever the user asks about Biorouter itself: what it is, how it works, who built it, or how to use or configure any of its features (extensions, skills, workflows, scheduler, knowledge bases, models and providers, secrets, CLI, or the desktop app).

2026-07-15
develop-biorouter-extension
Sonstige Computerberufe

Guide for building a Biorouter extension (.brxt file) — covers the required ZIP structure, manifest.json schema, the Python MCP server (pyproject.toml + console-script entry point), cross-platform dependency pitfalls, and optional bundled skills. Load this skill whenever the user wants to build, package, or publish a Biorouter extension.

2026-06-20
develop-biorouter-skill
Sonstige Computerberufe

Guide for authoring a high-quality Biorouter skill — the SKILL.md format and frontmatter, how Biorouter discovers and loads skills, writing a description that triggers reliably, progressive disclosure with supporting files, composing with subagents/workflows/hooks, testing for consistency and robustness, and packaging a skill as a zip. Load this skill whenever the user wants to create, write, improve, test, or publish a Biorouter (or Claude) skill.

2026-06-20
cdw-explore-schema
Datenbankarchitekten

Explore the CDW clinical schema, tables, and column relationships

2026-05-07
cdw-query-cohorts
Medizin- und Kliniklabortechnologen

Systematically build and refine patient cohorts from CDW clinical data

2026-05-07
spoke-knowledge-graph
Datenwissenschaftler

Traverse the SPOKE biomedical knowledge graph to find entity relationships

2026-05-07
omop-phenotype-query
Ärzte, Pathologen

Query the OMOP CDM to identify patient phenotypes and clinical concepts

2026-05-07
12 von 33 Repositories angezeigt