n1x-cortex

Use when the user wants to atomize a source document into draft Cortex notes — "atomize this doc", "turn this into atomic notes", or /atomize <source.md>. Distills each section into one-idea-per-note drafts (type, folder, tags, wikilinks) and writes them safely into _inbox/ via the cortex toolkit.

Use when the user wants to clean up near-duplicate notes in the Cortex vault — "merge the duplicates", "dedupe my notes", or /dupes-merge. Finds near-duplicate pairs, merges each conservatively into one note (preserving all content + links), and folds the pair into a single note reversibly.

Use when the user asks a question that should be answered from the Cortex knowledge graph — "what does the vault say about X", "find the rule for Y", or /query <question>. Runs cited retrieval over the vault and answers grounded in the returned notes, always citing sources.